1sqr

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:34, 1 May 2024) (edit) (undo)
 
(12 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1sqr.gif|left|200px]]
 
-
{{Structure
+
==Solution Structure of the 50S Ribosomal Protein L35AE from Pyrococcus furiosus. Northeast Structural Genomics Consortium Target PfR48.==
-
|PDB= 1sqr |SIZE=350|CAPTION= <scene name='initialview01'>1sqr</scene>
+
<StructureSection load='1sqr' size='340' side='right'caption='[[1sqr]]' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND=
+
<table><tr><td colspan='2'>[[1sqr]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SQR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1SQR FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
|GENE= RPL35AE, PF1872 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2261 Pyrococcus furiosus])
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1sqr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1sqr OCA], [https://pdbe.org/1sqr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1sqr RCSB], [https://www.ebi.ac.uk/pdbsum/1sqr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1sqr ProSAT], [https://www.topsan.org/Proteins/NESGC/1sqr TOPSAN]</span></td></tr>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PRK04337 PRK04337]</span>
+
</table>
-
|RELATEDENTRY=
+
== Function ==
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1sqr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1sqr OCA], [http://www.ebi.ac.uk/pdbsum/1sqr PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1sqr RCSB]</span>
+
[https://www.uniprot.org/uniprot/RL35A_PYRFU RL35A_PYRFU]
-
}}
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
'''Solution Structure of the 50S Ribosomal Protein L35AE from Pyrococcus furiosus. Northeast Structural Genomics Consortium Target PfR48.'''
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
 
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/sq/1sqr_consurf.spt"</scriptWhenChecked>
-
==About this Structure==
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
1SQR is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SQR OCA].
+
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1sqr ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Pyrococcus furiosus]]
[[Category: Pyrococcus furiosus]]
-
[[Category: Single protein]]
+
[[Category: Acton TB]]
-
[[Category: Acton, T B.]]
+
[[Category: Aramini JM]]
-
[[Category: Aramini, J M.]]
+
[[Category: Cort JR]]
-
[[Category: Cort, J R.]]
+
[[Category: Huang YJ]]
-
[[Category: Huang, Y J.]]
+
[[Category: Kennedy MA]]
-
[[Category: Kennedy, M A.]]
+
[[Category: Liu J]]
-
[[Category: Liu, J.]]
+
[[Category: Ma LC]]
-
[[Category: Ma, L C.]]
+
[[Category: Montelione GT]]
-
[[Category: Montelione, G T.]]
+
[[Category: Rost B]]
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Shastry R]]
-
[[Category: Rost, B.]]
+
[[Category: Snyder DA]]
-
[[Category: Shastry, R.]]
+
[[Category: Xiao R]]
-
[[Category: Snyder, D A.]]
+
-
[[Category: Xiao, R.]]
+
-
[[Category: autostructure]]
+
-
[[Category: beta-barrel]]
+
-
[[Category: nesg]]
+
-
[[Category: nmr structure]]
+
-
[[Category: northeast structural genomics consortium]]
+
-
[[Category: pfr48]]
+
-
[[Category: protein structure initiative]]
+
-
[[Category: psi]]
+
-
[[Category: ribosomal protein]]
+
-
[[Category: structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 23:45:43 2008''
+

Current revision

Solution Structure of the 50S Ribosomal Protein L35AE from Pyrococcus furiosus. Northeast Structural Genomics Consortium Target PfR48.

PDB ID 1sqr

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools