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5n9q

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(New page: '''Unreleased structure''' The entry 5n9q is ON HOLD until Paper Publication Authors: Tossavainen, H., Hellman, M., Vainonen, J., Kangasjarvi, J., Permi, P. Description: Structure of A...)
Current revision (10:20, 14 June 2023) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 5n9q is ON HOLD until Paper Publication
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==Structure of A. thaliana RCD1(468-567)==
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<StructureSection load='5n9q' size='340' side='right'caption='[[5n9q]]' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[5n9q]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5N9Q OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5N9Q FirstGlance]. <br>
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5n9q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5n9q OCA], [https://pdbe.org/5n9q PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5n9q RCSB], [https://www.ebi.ac.uk/pdbsum/5n9q PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5n9q ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/RCD1_ARATH RCD1_ARATH] Inactive ADP-ribosyltransferase that functions with SRO1 to regulate oxidative stress, hormonal and developmental responses. Required for embryogenesis, vegetative and reproductive development, and abiotic stress responses. May regulate several stress-responsive genes. Seems to play a larger developmental role than SRO1. Does not bind NAD in vitro.<ref>PMID:11018516</ref> <ref>PMID:11041881</ref> <ref>PMID:14657410</ref> <ref>PMID:15208394</ref> <ref>PMID:15728341</ref> <ref>PMID:16926493</ref> <ref>PMID:19548978</ref> <ref>PMID:19625634</ref> <ref>PMID:20226034</ref> <ref>PMID:21172813</ref>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Reactive oxygen species (ROS)-dependent signaling pathways from chloroplasts and mitochondria merge at the nuclear protein RADICAL-INDUCED CELL DEATH1 (RCD1). RCD1 interacts in vivo and suppresses the activity of the transcription factors ANAC013 and ANAC017, which mediate a ROS-related retrograde signal originating from mitochondrial complex III. Inactivation of RCD1 leads to increased expression of mitochondrial dysfunction stimulon (MDS) genes regulated by ANAC013 and ANAC017. Accumulating MDS gene products, including alternative oxidases (AOXs), affect redox status of the chloroplasts, leading to changes in chloroplast ROS processing and increased protection of photosynthetic apparatus. ROS alter the abundance, thiol redox state and oligomerization of the RCD1 protein in vivo, providing feedback control on its function. RCD1-dependent regulation is linked to chloroplast signaling by 3'-phosphoadenosine 5'-phosphate (PAP). Thus, RCD1 integrates organellar signaling from chloroplasts and mitochondria to establish transcriptional control over the metabolic processes in both organelles.
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Authors: Tossavainen, H., Hellman, M., Vainonen, J., Kangasjarvi, J., Permi, P.
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Arabidopsis RCD1 coordinates chloroplast and mitochondrial functions through interaction with ANAC transcription factors.,Shapiguzov A, Vainonen JP, Hunter K, Tossavainen H, Tiwari A, Jarvi S, Hellman M, Aarabi F, Alseekh S, Wybouw B, Van Der Kelen K, Nikkanen L, Krasensky-Wrzaczek J, Sipari N, Keinanen M, Tyystjarvi E, Rintamaki E, De Rybel B, Salojarvi J, Van Breusegem F, Fernie AR, Brosche M, Permi P, Aro EM, Wrzaczek M, Kangasjarvi J Elife. 2019 Feb 15;8:e43284. doi: 10.7554/eLife.43284. PMID:30767893<ref>PMID:30767893</ref>
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Description: Structure of A. thaliana RCD1(468-567)
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Hellman, M]]
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<div class="pdbe-citations 5n9q" style="background-color:#fffaf0;"></div>
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[[Category: Tossavainen, H]]
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[[Category: Kangasjarvi, J]]
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==See Also==
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[[Category: Permi, P]]
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*[[Poly(ADP-ribose) polymerase 3D structures|Poly(ADP-ribose) polymerase 3D structures]]
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[[Category: Vainonen, J]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Arabidopsis thaliana]]
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[[Category: Large Structures]]
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[[Category: Hellman M]]
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[[Category: Kangasjarvi J]]
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[[Category: Permi P]]
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[[Category: Tossavainen H]]
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[[Category: Vainonen J]]

Current revision

Structure of A. thaliana RCD1(468-567)

PDB ID 5n9q

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