This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5x70

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "5x70" [edit=sysop:move=sysop])
Current revision (07:55, 22 November 2023) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 5x70 is ON HOLD
+
==Crystal structure of Rice Dwarf Virus P5 in complex with a ssRNA oligomer==
-
 
+
<StructureSection load='5x70' size='340' side='right'caption='[[5x70]], [[Resolution|resolution]] 3.30&Aring;' scene=''>
-
Authors: Nakamichi, Y., Higashiura, A., Nakagawa, A.
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[5x70]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Rice_dwarf_virus Rice dwarf virus] and [https://en.wikipedia.org/wiki/Rice_dwarf_virus_(isolate_O) Rice dwarf virus (isolate O)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5X70 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5X70 FirstGlance]. <br>
-
Description: Crystal structure of Rice Dwarf Virus P5 in complex with a ssRNA oligomer
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.3&#8491;</td></tr>
-
[[Category: Unreleased Structures]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5x70 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5x70 OCA], [https://pdbe.org/5x70 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5x70 RCSB], [https://www.ebi.ac.uk/pdbsum/5x70 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5x70 ProSAT]</span></td></tr>
-
[[Category: Nakamichi, Y]]
+
</table>
-
[[Category: Nakagawa, A]]
+
== Function ==
-
[[Category: Higashiura, A]]
+
[https://www.uniprot.org/uniprot/MCE_RDVA MCE_RDVA] Enzyme involved in mRNA capping (Potential). Binds to GTP and might have guanylyltransferase activity. Together with the RNA-directed RNA polymerase P1 and protein P7, forms an transcriptional complex positioned near the channels situated at each of the five-fold vertices of the core (By similarity).
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Rice dwarf virus]]
 +
[[Category: Higashiura A]]
 +
[[Category: Nakagawa A]]
 +
[[Category: Nakamichi Y]]

Current revision

Crystal structure of Rice Dwarf Virus P5 in complex with a ssRNA oligomer

PDB ID 5x70

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools