5x88

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(New page: '''Unreleased structure''' The entry 5x88 is ON HOLD Authors: Description: Category: Unreleased Structures)
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'''Unreleased structure'''
 
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The entry 5x88 is ON HOLD
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==A crystal structure of cutinases from Malbranchea cinnamomea==
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<StructureSection load='5x88' size='340' side='right'caption='[[5x88]], [[Resolution|resolution]] 1.76&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[5x88]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Malbranchea_cinnamomea Malbranchea cinnamomea]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5X88 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5X88 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.76&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5x88 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5x88 OCA], [https://pdbe.org/5x88 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5x88 RCSB], [https://www.ebi.ac.uk/pdbsum/5x88 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5x88 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/A0A1S6YJF3_MALCI A0A1S6YJF3_MALCI] Catalyzes the hydrolysis of complex carboxylic polyesters found in the cell wall of plants. Degrades cutin, a macromolecule that forms the structure of the plant cuticle.[RuleBase:RU361263]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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BACKGROUND: Butyl butyrate has been considered as a promising fuel source because it is a kind of natural ester which can be converted from renewable and sustainable lignocellulosic biomass. Compared with the conventional chemical methods for butyl butyrate production, the enzymatic approach has been demonstrated to be more attractive, mainly owing to the mild reaction conditions, high specificity, low energy consumption, and environmental friendliness. Cutinases play an important role in the butyl butyrate production process. However, the production level of cutinases is still relatively low. Thus, to identify novel cutinases suitable for butyl butyrate synthesis and enhance their yields is of great value in biofuel industry. RESULTS: A novel cutinase gene (McCut) was cloned from a thermophilic fungus Malbranchea cinnamomea and expressed in Pichia pastoris. The highest cutinase activity of 12, 536 U/mL was achieved in 5-L fermentor, which is by far the highest production for a cutinase. McCut was optimally active at pH 8.0 and 45 degrees C. It exhibited excellent stability within the pH range of 3.0-10.5 and up to 75 degrees C. The cutinase displayed broad substrate specificity with the highest activity towards p-nitrophenyl butyrate and tributyrin. It was capable of hydrolyzing cutin, polycaprolactone, and poly(butylene succinate). Moreover, McCut efficiently synthesized butyl butyrate with a maximum esterification efficiency of 96.9% at 4 h. The overall structure of McCut was resolved as a typical alpha/beta-hydrolase fold. The structural differences between McCut and Aspergillus oryzae cutinase in groove and loop provide valuable information for redesign of McCut. These excellent features make it useful in biosynthesis and biodegradation fields. CONCLUSIONS: A novel cutinase from M. cinnamomea was identified and characterized for the first time. High-level expression by P. pastoris is by far the highest for a cutinase. The enzyme exhibited excellent stability and high esterification efficiency for butyl butyrate production, which may make it a good candidate in biofuel and chemical industries.
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Authors:
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High-level expression and characterization of a novel cutinase from Malbranchea cinnamomea suitable for butyl butyrate production.,Duan X, Liu Y, You X, Jiang Z, Yang S, Yang S Biotechnol Biofuels. 2017 Sep 19;10:223. doi: 10.1186/s13068-017-0912-z., eCollection 2017. PMID:28932264<ref>PMID:28932264</ref>
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Description:
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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<div class="pdbe-citations 5x88" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Cutinase 3D structures|Cutinase 3D structures]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Malbranchea cinnamomea]]
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[[Category: Huang P]]
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[[Category: Jiang Z]]
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[[Category: Ma JW]]
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[[Category: Yang SQ]]
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[[Category: You X]]

Current revision

A crystal structure of cutinases from Malbranchea cinnamomea

PDB ID 5x88

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