This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4rvh

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:30, 8 March 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Crystal structure of MtmC in complex with SAH and TDP-4-keto-D-olivose==
==Crystal structure of MtmC in complex with SAH and TDP-4-keto-D-olivose==
-
<StructureSection load='4rvh' size='340' side='right' caption='[[4rvh]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
+
<StructureSection load='4rvh' size='340' side='right'caption='[[4rvh]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4rvh]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4RVH OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4RVH FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4rvh]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_argillaceus Streptomyces argillaceus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4RVH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4RVH FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=3YN:[(2R,3S,5R)-3-HYDROXY-5-(5-METHYL-2,4-DIOXO-3,4-DIHYDROPYRIMIDIN-1(2H)-YL)TETRAHYDROFURAN-2-YL]METHYL+(2R,4R,6R)-4-HYDROXY-6-METHYL-5-OXOTETRAHYDRO-2H-PYRAN-2-YL+DIHYDROGEN+DIPHOSPHATE'>3YN</scene>, <scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=3YN:[(2R,3S,5R)-3-HYDROXY-5-(5-METHYL-2,4-DIOXO-3,4-DIHYDROPYRIMIDIN-1(2H)-YL)TETRAHYDROFURAN-2-YL]METHYL+(2R,4R,6R)-4-HYDROXY-6-METHYL-5-OXOTETRAHYDRO-2H-PYRAN-2-YL+DIHYDROGEN+DIPHOSPHATE'>3YN</scene>, <scene name='pdbligand=CSO:S-HYDROXYCYSTEINE'>CSO</scene>, <scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CSO:S-HYDROXYCYSTEINE'>CSO</scene></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4rvh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4rvh OCA], [https://pdbe.org/4rvh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4rvh RCSB], [https://www.ebi.ac.uk/pdbsum/4rvh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4rvh ProSAT]</span></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1rv9|1rv9]], [[4rvd|4rvd]], [[4rvf|4rvf]], [[4rvg|4rvg]]</td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4rvh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4rvh OCA], [http://pdbe.org/4rvh PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4rvh RCSB], [http://www.ebi.ac.uk/pdbsum/4rvh PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4rvh ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q194Q4_STRAA Q194Q4_STRAA]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 22: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Chen, J M]]
+
[[Category: Large Structures]]
-
[[Category: Hou, C]]
+
[[Category: Streptomyces argillaceus]]
-
[[Category: Rohr, J]]
+
[[Category: Chen J-M]]
-
[[Category: Tsodikov, O V]]
+
[[Category: Hou C]]
-
[[Category: C-methyltransferase]]
+
[[Category: Rohr J]]
-
[[Category: Sam]]
+
[[Category: Tsodikov OV]]
-
[[Category: Tdp-4-keto-d-olivose]]
+
-
[[Category: Transferase]]
+

Current revision

Crystal structure of MtmC in complex with SAH and TDP-4-keto-D-olivose

PDB ID 4rvh

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools