5jr4

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (19:03, 20 September 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Crystal structure of FimH A27V/V163A from E. coli UTI89 bound to FimG N-terminal extension==
==Crystal structure of FimH A27V/V163A from E. coli UTI89 bound to FimG N-terminal extension==
-
<StructureSection load='5jr4' size='340' side='right' caption='[[5jr4]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
+
<StructureSection load='5jr4' size='340' side='right'caption='[[5jr4]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5jr4]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5JR4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5JR4 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5jr4]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_UTI89 Escherichia coli UTI89]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5JR4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5JR4 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.596&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5jqi|5jqi]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5jr4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5jr4 OCA], [http://pdbe.org/5jr4 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5jr4 RCSB], [http://www.ebi.ac.uk/pdbsum/5jr4 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5jr4 ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5jr4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5jr4 OCA], [https://pdbe.org/5jr4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5jr4 RCSB], [https://www.ebi.ac.uk/pdbsum/5jr4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5jr4 ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q1R2J4_ECOUT Q1R2J4_ECOUT]
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Positive selection in the two-domain type 1 pilus adhesin FimH enhances Escherichia coli fitness in urinary tract infection (UTI). We report a comprehensive atomic-level view of FimH in two-state conformational ensembles in solution, composed of one low-affinity tense (T) and multiple high-affinity relaxed (R) conformations. Positively selected residues allosterically modulate the equilibrium between these two conformational states, each of which engages mannose through distinct binding orientations. A FimH variant that only adopts the R state is severely attenuated early in a mouse model of uncomplicated UTI but is proficient at colonizing catheterized bladders in vivo or bladder transitional-like epithelial cells in vitro. Thus, the bladder habitat has barrier(s) to R state-mediated colonization possibly conferred by the terminally differentiated bladder epithelium and/or decoy receptors in urine. Together, our studies reveal the conformational landscape in solution, binding mechanisms, and adhesive strength of an allosteric two-domain adhesin that evolved "moderate" affinity to optimize persistence in the bladder during UTI.
 +
 +
Evolutionary fine-tuning of conformational ensembles in FimH during host-pathogen interactions.,Kalas V, Pinkner JS, Hannan TJ, Hibbing ME, Dodson KW, Holehouse AS, Zhang H, Tolia NH, Gross ML, Pappu RV, Janetka J, Hultgren SJ Sci Adv. 2017 Feb 10;3(2):e1601944. doi: 10.1126/sciadv.1601944. eCollection 2017, Feb. PMID:28246638<ref>PMID:28246638</ref>
 +
 +
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 +
</div>
 +
<div class="pdbe-citations 5jr4" style="background-color:#fffaf0;"></div>
==See Also==
==See Also==
-
*[[Adhesin|Adhesin]]
+
*[[Adhesin 3D structures|Adhesin 3D structures]]
 +
== References ==
 +
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Hultgren, S J]]
+
[[Category: Escherichia coli UTI89]]
-
[[Category: Kalas, V]]
+
[[Category: Large Structures]]
-
[[Category: Carbohydrate binding protein]]
+
[[Category: Hultgren SJ]]
-
[[Category: Donor strand exchange]]
+
[[Category: Kalas V]]
-
[[Category: Immunoglobulin fold]]
+
-
[[Category: Lectin]]
+
-
[[Category: Sugar binding protein]]
+

Current revision

Crystal structure of FimH A27V/V163A from E. coli UTI89 bound to FimG N-terminal extension

PDB ID 5jr4

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools