5u2p
From Proteopedia
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==The crystal structure of Tp0737 from Treponema pallidum== | ==The crystal structure of Tp0737 from Treponema pallidum== | ||
| - | <StructureSection load='5u2p' size='340' side='right' caption='[[5u2p]], [[Resolution|resolution]] 1.76Å' scene=''> | + | <StructureSection load='5u2p' size='340' side='right'caption='[[5u2p]], [[Resolution|resolution]] 1.76Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[5u2p]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5U2P OCA]. For a <b>guided tour on the structure components</b> use [ | + | <table><tr><td colspan='2'>[[5u2p]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Treponema_pallidum_subsp._pallidum Treponema pallidum subsp. pallidum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5U2P OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5U2P FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BR:BROMIDE+ION'>BR</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.76Å</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BR:BROMIDE+ION'>BR</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr> |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5u2p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5u2p OCA], [https://pdbe.org/5u2p PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5u2p RCSB], [https://www.ebi.ac.uk/pdbsum/5u2p PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5u2p ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| - | <div style="background-color:#fffaf0;"> | ||
| - | == Publication Abstract from PubMed == | ||
| - | The spirochete Treponema pallidum is the causative agent of syphilis, a sexually transmitted infection of major global importance. Other closely related subspecies of Treponema also are the etiological agents of the endemic treponematoses, such as yaws, pinta, and bejel. The inability of T. pallidum and its close relatives to be cultured in vitro has prompted efforts to characterize T. pallidum's proteins structurally and biophysically, particularly those potentially relevant to treponemal membrane biology, with the goal of possibly revealing the functions of those proteins. This report describes the structure of the treponemal protein Tp0737; this polypeptide has a fold characteristic of a class of periplasmic ligand-binding proteins associated with ABC-type transporters. Although no ligand for the protein was observed in electron-density maps, and thus the nature of the native ligand remains obscure, the structural data described herein provide a foundation for further efforts to elucidate the ligand and thus the function of this protein in T. pallidum. This article is protected by copyright. All rights reserved. | ||
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| - | Functional clues from the crystal structure of an orphan periplasmic ligand-binding protein from Treponema pallidum.,Brautigam CA, Deka RK, Liu WZ, Tomchick DR, Norgard MV Protein Sci. 2017 Feb 7. doi: 10.1002/pro.3133. PMID:28168761<ref>PMID:28168761</ref> | ||
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| - | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
| - | </div> | ||
| - | <div class="pdbe-citations 5u2p" style="background-color:#fffaf0;"></div> | ||
| - | == References == | ||
| - | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: | + | [[Category: Treponema pallidum subsp. pallidum]] |
| - | [[Category: | + | [[Category: Brautigam CA]] |
| - | [[Category: | + | [[Category: Deka RK]] |
| - | [[Category: | + | [[Category: Norgard MV]] |
| - | [[Category: | + | [[Category: Tomchick DR]] |
| - | + | ||
Current revision
The crystal structure of Tp0737 from Treponema pallidum
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