This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5u5b

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:21, 4 October 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Coiled Coil Peptide Metal Coordination Framework: Trimer Fold==
==Coiled Coil Peptide Metal Coordination Framework: Trimer Fold==
-
<StructureSection load='5u5b' size='340' side='right' caption='[[5u5b]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
+
<StructureSection load='5u5b' size='340' side='right'caption='[[5u5b]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5u5b]] is a 3 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5U5B OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5U5B FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5u5b]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5U5B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5U5B FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=7WJ:(2S)-2-AMINO-4-[([1~2~,2~2~ 2~6~,3~2~-TERPYRIDINE]-2~4~-CARBONYL)AMINO]BUTANOIC+ACID'>7WJ</scene>, <scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=7WJ:(2S)-2-AMINO-4-[([1~2~,2~2~ 2~6~,3~2~-TERPYRIDINE]-2~4~-CARBONYL)AMINO]BUTANOIC+ACID'>7WJ</scene>, <scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5u59|5u59]], [[5u5a|5u5a]], [[5u5c|5u5c]]</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5u5b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5u5b OCA], [https://pdbe.org/5u5b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5u5b RCSB], [https://www.ebi.ac.uk/pdbsum/5u5b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5u5b ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5u5b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5u5b OCA], [http://pdbe.org/5u5b PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5u5b RCSB], [http://www.ebi.ac.uk/pdbsum/5u5b PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5u5b ProSAT]</span></td></tr>
+
</table>
</table>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
Line 22: Line 21:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Horne, W S]]
+
[[Category: Large Structures]]
-
[[Category: Murnin, M J]]
+
[[Category: Synthetic construct]]
-
[[Category: Tavenor, N A]]
+
[[Category: Horne WS]]
-
[[Category: De novo protein]]
+
[[Category: Murnin MJ]]
-
[[Category: Designed peptide]]
+
[[Category: Tavenor NA]]
-
[[Category: Metal coordination framework]]
+
-
[[Category: Supramolecular assembly]]
+
-
[[Category: Synthetic]]
+

Current revision

Coiled Coil Peptide Metal Coordination Framework: Trimer Fold

PDB ID 5u5b

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools