4xae

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:42, 27 September 2023) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==Structure of Feruloyl-CoA 6-hydroxylase (F6H) from Arabidopsis thaliana==
==Structure of Feruloyl-CoA 6-hydroxylase (F6H) from Arabidopsis thaliana==
-
<StructureSection load='4xae' size='340' side='right' caption='[[4xae]], [[Resolution|resolution]] 2.77&Aring;' scene=''>
+
<StructureSection load='4xae' size='340' side='right'caption='[[4xae]], [[Resolution|resolution]] 2.77&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4xae]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4XAE OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4XAE FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4xae]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4XAE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4XAE FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.769&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4xae FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4xae OCA], [http://pdbe.org/4xae PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4xae RCSB], [http://www.ebi.ac.uk/pdbsum/4xae PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4xae ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4xae FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4xae OCA], [https://pdbe.org/4xae PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4xae RCSB], [https://www.ebi.ac.uk/pdbsum/4xae PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4xae ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/F6H1_ARATH F6H1_ARATH]] 2-oxoglutarate (OG)- and Fe(II)-dependent dioxygenase (2OGD)involved in scopoletin biosynthesis. Converts feruloyl CoA into 6'-hydroxyferuloyl CoA but has no activity with ferulic acid, feruloylquinic acid, caffeic acid, caffeoyl CoA, p-coumaric acid, cinnamic acid, cinnamoyl CoA or benzoyl CoA.<ref>PMID:18547395</ref>
+
[https://www.uniprot.org/uniprot/F6H1_ARATH F6H1_ARATH] 2-oxoglutarate (OG)- and Fe(II)-dependent dioxygenase (2OGD)involved in scopoletin biosynthesis. Converts feruloyl CoA into 6'-hydroxyferuloyl CoA but has no activity with ferulic acid, feruloylquinic acid, caffeic acid, caffeoyl CoA, p-coumaric acid, cinnamic acid, cinnamoyl CoA or benzoyl CoA.<ref>PMID:18547395</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 23: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Kandavelu, P]]
+
[[Category: Arabidopsis thaliana]]
-
[[Category: Rose, J]]
+
[[Category: Large Structures]]
-
[[Category: Wang, B C]]
+
[[Category: Kandavelu P]]
-
[[Category: Yan, Y]]
+
[[Category: Rose J]]
-
[[Category: Zhang, H]]
+
[[Category: Wang BC]]
-
[[Category: Zhou, D]]
+
[[Category: Yan Y]]
-
[[Category: 2-oxoglutarate dependent dioxygenase]]
+
[[Category: Zhang H]]
-
[[Category: Coumarin]]
+
[[Category: Zhou D]]
-
[[Category: Oxidoreductase]]
+
-
[[Category: Protein engineering]]
+

Current revision

Structure of Feruloyl-CoA 6-hydroxylase (F6H) from Arabidopsis thaliana

PDB ID 4xae

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/4xae"
Personal tools