5umd

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{{Large structure}}
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==Structure of the Plasmodium falciparum 80S ribosome bound to the antimalarial drug mefloquine==
==Structure of the Plasmodium falciparum 80S ribosome bound to the antimalarial drug mefloquine==
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<StructureSection load='5umd' size='340' side='right' caption='[[5umd]], [[Resolution|resolution]] 3.20&Aring;' scene=''>
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<SX load='5umd' size='340' side='right' viewer='molstar' caption='[[5umd]], [[Resolution|resolution]] 3.20&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5umd]] is a 44 chain structure with sequence from [http://en.wikipedia.org/wiki/Plasmodium_falciparum_3d7 Plasmodium falciparum 3d7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5UMD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5UMD FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5umd]] is a 44 chain structure with sequence from [http://en.wikipedia.org/wiki/Plasmodium_falciparum_3d7 Plasmodium falciparum 3d7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5UMD OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5UMD FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=YMZ:MEFLOQUINE'>YMZ</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=YMZ:MEFLOQUINE'>YMZ</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5umd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5umd OCA], [http://pdbe.org/5umd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5umd RCSB], [http://www.ebi.ac.uk/pdbsum/5umd PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5umd ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5umd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5umd OCA], [http://pdbe.org/5umd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5umd RCSB], [http://www.ebi.ac.uk/pdbsum/5umd PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5umd ProSAT]</span></td></tr>
</table>
</table>
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{{Large structure}}
 
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/C0H4L5_PLAF7 C0H4L5_PLAF7]] Binds to the 23S rRNA (By similarity).[RuleBase:RU000576]
[[http://www.uniprot.org/uniprot/C0H4L5_PLAF7 C0H4L5_PLAF7]] Binds to the 23S rRNA (By similarity).[RuleBase:RU000576]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Malaria control is heavily dependent on chemotherapeutic agents for disease prevention and drug treatment. Defining the mechanism of action for licensed drugs, for which no target is characterized, is critical to the development of their second-generation derivatives to improve drug potency towards inhibition of their molecular targets. Mefloquine is a widely used antimalarial without a known mode of action. Here, we demonstrate that mefloquine is a protein synthesis inhibitor. We solved a 3.2 A cryo-electron microscopy structure of the Plasmodium falciparum 80S ribosome with the (+)-mefloquine enantiomer bound to the ribosome GTPase-associated centre. Mutagenesis of mefloquine-binding residues generates parasites with increased resistance, confirming the parasite-killing mechanism. Furthermore, structure-guided derivatives with an altered piperidine group, predicted to improve binding, show enhanced parasiticidal effect. These data reveal one possible mode of action for mefloquine and demonstrate the vast potential of cryo-electron microscopy to guide the development of mefloquine derivatives to inhibit parasite protein synthesis.
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Mefloquine targets the Plasmodium falciparum 80S ribosome to inhibit protein synthesis.,Wong W, Bai XC, Sleebs BE, Triglia T, Brown A, Thompson JK, Jackson KE, Hanssen E, Marapana DS, Fernandez IS, Ralph SA, Cowman AF, Scheres SH, Baum J Nat Microbiol. 2017 Mar 13;2:17031. doi: 10.1038/nmicrobiol.2017.31. PMID:28288098<ref>PMID:28288098</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 5umd" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Ribosome 3D structures|Ribosome 3D structures]]
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== References ==
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<references/>
__TOC__
__TOC__
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</StructureSection>
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</SX>
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[[Category: Large Structures]]
[[Category: Plasmodium falciparum 3d7]]
[[Category: Plasmodium falciparum 3d7]]
[[Category: Bai, X C]]
[[Category: Bai, X C]]

Current revision

Structure of the Plasmodium falciparum 80S ribosome bound to the antimalarial drug mefloquine

5umd, resolution 3.20Å

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