This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
1tlj
From Proteopedia
(Difference between revisions)
| (11 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:1tlj.jpg|left|200px]] | ||
| - | + | ==Crystal Structure of Conserved Protein of Unknown Function SSO0622 from Sulfolobus solfataricus== | |
| - | + | <StructureSection load='1tlj' size='340' side='right'caption='[[1tlj]], [[Resolution|resolution]] 2.80Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[1tlj]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharolobus_solfataricus Saccharolobus solfataricus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TLJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1TLJ FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8Å</td></tr> | |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1tlj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tlj OCA], [https://pdbe.org/1tlj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1tlj RCSB], [https://www.ebi.ac.uk/pdbsum/1tlj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1tlj ProSAT], [https://www.topsan.org/Proteins/MCSG/1tlj TOPSAN]</span></td></tr> | |
| - | + | </table> | |
| - | + | == Function == | |
| - | + | [https://www.uniprot.org/uniprot/TYW3_SACS2 TYW3_SACS2] S-adenosyl-L-methionine-dependent methyltransferase that acts as a component of the wyosine derivatives biosynthesis pathway. Probably methylates N-4 position of wybutosine-86 to produce wybutosine-72.[HAMAP-Rule:MF_00266] | |
| - | + | == Evolutionary Conservation == | |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| - | + | Check<jmol> | |
| - | + | <jmolCheckbox> | |
| - | == | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/tl/1tlj_consurf.spt"</scriptWhenChecked> |
| - | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |
| - | [[Category: | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | [[Category: | + | </jmolCheckbox> |
| - | [[Category: Edwards | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1tlj ConSurf]. |
| - | [[Category: Jia | + | <div style="clear:both"></div> |
| - | [[Category: Kudrytska | + | __TOC__ |
| - | + | </StructureSection> | |
| - | [[Category: Savchenko | + | [[Category: Large Structures]] |
| - | [[Category: Skarina | + | [[Category: Saccharolobus solfataricus]] |
| - | [[Category: Walker | + | [[Category: Edwards A]] |
| - | [[Category: Wong | + | [[Category: Jia Z]] |
| - | + | [[Category: Kudrytska M]] | |
| - | + | [[Category: Savchenko A]] | |
| - | + | [[Category: Skarina T]] | |
| - | + | [[Category: Walker J]] | |
| - | + | [[Category: Wong AHY]] | |
| - | + | ||
| - | + | ||
Current revision
Crystal Structure of Conserved Protein of Unknown Function SSO0622 from Sulfolobus solfataricus
| |||||||||||
