5juz

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (19:09, 20 September 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Crystal structure of human FPPS in complex with an allosteric inhibitor CL-06-057==
==Crystal structure of human FPPS in complex with an allosteric inhibitor CL-06-057==
-
<StructureSection load='5juz' size='340' side='right' caption='[[5juz]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
+
<StructureSection load='5juz' size='340' side='right'caption='[[5juz]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5juz]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5JUZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5JUZ FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5juz]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5JUZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5JUZ FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=YL4:[(R)-(2,3-DIHYDRO-1-BENZOFURAN-5-YL){[6-(4-METHYLPHENYL)THIENO[2,3-D]PYRIMIDIN-4-YL]AMINO}METHYL]PHOSPHONIC+ACID'>YL4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5jv2|5jv2]], [[5jv1|5jv1]], [[5jv0|5jv0]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=YL4:[(R)-(2,3-DIHYDRO-1-BENZOFURAN-5-YL){[6-(4-METHYLPHENYL)THIENO[2,3-D]PYRIMIDIN-4-YL]AMINO}METHYL]PHOSPHONIC+ACID'>YL4</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5juz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5juz OCA], [http://pdbe.org/5juz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5juz RCSB], [http://www.ebi.ac.uk/pdbsum/5juz PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5juz ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5juz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5juz OCA], [https://pdbe.org/5juz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5juz RCSB], [https://www.ebi.ac.uk/pdbsum/5juz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5juz ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/FPPS_HUMAN FPPS_HUMAN]] Key enzyme in isoprenoid biosynthesis which catalyzes the formation of farnesyl diphosphate (FPP), a precursor for several classes of essential metabolites including sterols, dolichols, carotenoids, and ubiquinones. FPP also serves as substrate for protein farnesylation and geranylgeranylation. Catalyzes the sequential condensation of isopentenyl pyrophosphate with the allylic pyrophosphates, dimethylallyl pyrophosphate, and then with the resultant geranylpyrophosphate to the ultimate product farnesyl pyrophosphate.
+
[https://www.uniprot.org/uniprot/FPPS_HUMAN FPPS_HUMAN] Key enzyme in isoprenoid biosynthesis which catalyzes the formation of farnesyl diphosphate (FPP), a precursor for several classes of essential metabolites including sterols, dolichols, carotenoids, and ubiquinones. FPP also serves as substrate for protein farnesylation and geranylgeranylation. Catalyzes the sequential condensation of isopentenyl pyrophosphate with the allylic pyrophosphates, dimethylallyl pyrophosphate, and then with the resultant geranylpyrophosphate to the ultimate product farnesyl pyrophosphate.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 19: Line 19:
</div>
</div>
<div class="pdbe-citations 5juz" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 5juz" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Farnesyl diphosphate synthase 3D structures|Farnesyl diphosphate synthase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Berghuis, A M]]
+
[[Category: Homo sapiens]]
-
[[Category: Leung, C Y]]
+
[[Category: Large Structures]]
-
[[Category: Magder, A]]
+
[[Category: Berghuis AM]]
-
[[Category: Park, J]]
+
[[Category: Leung CY]]
-
[[Category: Tsantrizos, Y S]]
+
[[Category: Magder A]]
-
[[Category: Transferase]]
+
[[Category: Park J]]
-
[[Category: Transferase-transferase inhibitor complex]]
+
[[Category: Tsantrizos YS]]

Current revision

Crystal structure of human FPPS in complex with an allosteric inhibitor CL-06-057

PDB ID 5juz

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools