1tqu

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (04:55, 17 October 2024) (edit) (undo)
 
(12 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1tqu.gif|left|200px]]
 
-
{{Structure
+
==Golgi alpha-Mannosidase II In Complex With The Salacinol Analog Ghavamiol==
-
|PDB= 1tqu |SIZE=350|CAPTION= <scene name='initialview01'>1tqu</scene>, resolution 2.03&Aring;
+
<StructureSection load='1tqu' size='340' side='right'caption='[[1tqu]], [[Resolution|resolution]] 2.03&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=GHA:1&#39;-((1,4-DIDEOXY-1,4-IMINO-D-ARABINITOL)-4-N-AMMONIUM)-1&#39;-DEOXY-L-ERYTHRITOL-3&#39;-SULFATE+INNER+SALT'>GHA</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene>, <scene name='pdbligand=NDG:2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE'>NDG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
+
<table><tr><td colspan='2'>[[1tqu]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Drosophila_melanogaster Drosophila melanogaster]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TQU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1TQU FirstGlance]. <br>
-
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Mannosyl-oligosaccharide_1,3-1,6-alpha-mannosidase Mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.114 3.2.1.114] </span>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.03&#8491;</td></tr>
-
|GENE= ALPHA-MAN-II, GMII, CG18474/CG18802/CG8139 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=7227 Drosophila melanogaster])
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GHA:1-((1,4-DIDEOXY-1,4-IMINO-D-ARABINITOL)-4-N-AMMONIUM)-1-DEOXY-L-ERYTHRITOL-3-SULFATE+INNER+SALT'>GHA</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
|DOMAIN=
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1tqu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tqu OCA], [https://pdbe.org/1tqu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1tqu RCSB], [https://www.ebi.ac.uk/pdbsum/1tqu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1tqu ProSAT]</span></td></tr>
-
|RELATEDENTRY=[[1hty|1HTY]], [[1hww|1HWW]], [[1hxk|1HXK]], [[1ps3|1PS3]], [[1qwn|1QWN]], [[1qwu|1QWU]], [[1qx1|1QX1]], [[1r33|1R33]], [[1r34|1R34]], [[1tqs|1TQS]], [[1tqt|1TQT]], [[1tqv|1TQV]], [[1tqw|1TQW]]
+
</table>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1tqu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tqu OCA], [http://www.ebi.ac.uk/pdbsum/1tqu PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1tqu RCSB]</span>
+
== Function ==
-
}}
+
[https://www.uniprot.org/uniprot/MAN2_DROME MAN2_DROME] Catalyzes the first committed step in the biosynthesis of complex N-glycans. It controls conversion of high mannose to complex N-glycans; the final hydrolytic step in the N-glycan maturation pathway (By similarity).
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/tq/1tqu_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1tqu ConSurf].
 +
<div style="clear:both"></div>
-
'''Golgi alpha-Mannosidase II In Complex With The Salacinol Analog Ghavamiol'''
+
==See Also==
-
 
+
*[[Mannosidase 3D structures|Mannosidase 3D structures]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
1TQU is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Drosophila_melanogaster Drosophila melanogaster]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TQU OCA].
+
[[Category: Drosophila melanogaster]]
[[Category: Drosophila melanogaster]]
-
[[Category: Mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase]]
+
[[Category: Large Structures]]
-
[[Category: Single protein]]
+
[[Category: Ghavami A]]
-
[[Category: Ghavami, A.]]
+
[[Category: Johnston BD]]
-
[[Category: Johnston, B D.]]
+
[[Category: Kuntz DA]]
-
[[Category: Kuntz, D A.]]
+
[[Category: Pinto BM]]
-
[[Category: Pinto, B M.]]
+
[[Category: Rose DR]]
-
[[Category: Rose, D R.]]
+
-
[[Category: hydrolase]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 23:59:55 2008''
+

Current revision

Golgi alpha-Mannosidase II In Complex With The Salacinol Analog Ghavamiol

PDB ID 1tqu

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools