4l5o

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:55, 20 March 2024) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==Crystal structure of 26 kDa GST D26H mutant of Clonorchis sinensis==
==Crystal structure of 26 kDa GST D26H mutant of Clonorchis sinensis==
-
<StructureSection load='4l5o' size='340' side='right' caption='[[4l5o]], [[Resolution|resolution]] 2.09&Aring;' scene=''>
+
<StructureSection load='4l5o' size='340' side='right'caption='[[4l5o]], [[Resolution|resolution]] 2.09&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4l5o]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Closi Closi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4L5O OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4L5O FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4l5o]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Clonorchis_sinensis Clonorchis sinensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4L5O OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4L5O FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GSH:GLUTATHIONE'>GSH</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.09&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3iso|3iso]], [[4l5l|4l5l]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GSH:GLUTATHIONE'>GSH</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4l5o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4l5o OCA], [http://pdbe.org/4l5o PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4l5o RCSB], [http://www.ebi.ac.uk/pdbsum/4l5o PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4l5o ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4l5o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4l5o OCA], [https://pdbe.org/4l5o PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4l5o RCSB], [https://www.ebi.ac.uk/pdbsum/4l5o PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4l5o ProSAT]</span></td></tr>
</table>
</table>
-
<div style="background-color:#fffaf0;">
+
== Function ==
-
== Publication Abstract from PubMed ==
+
[https://www.uniprot.org/uniprot/Q25595_CLOSI Q25595_CLOSI]
-
The crystal structures of CsGST in two different space groups revealed that Asp26 and His79 coordinate a zinc ion. In one space group, His46 of an adjacent molecule participates in the coordination within 2.0A. In the other space group, Asp26, His79 and a water molecule coordinate a zinc ion. The CsGST-D26H structure showed that four histidine residues - His26 and His79 from one molecule and the same residues from a symmetry-related neighboring molecule - coordinate a zinc ion. The coordinated zinc ions are located between two molecules and mediate molecular contacts within the crystal.
+
-
 
+
-
Crystal structures of 26kDa Clonorchis sinensis glutathione S-transferase reveal zinc binding and putative metal binding.,Han YH, Hong SJ, Cheong HK, Chung YJ Biochem Biophys Res Commun. 2013 Aug 23;438(2):457-61. doi:, 10.1016/j.bbrc.2013.07.102. Epub 2013 Jul 31. PMID:23916611<ref>PMID:23916611</ref>
+
-
 
+
-
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
+
-
</div>
+
-
<div class="pdbe-citations 4l5o" style="background-color:#fffaf0;"></div>
+
-
== References ==
+
-
<references/>
+
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Closi]]
+
[[Category: Clonorchis sinensis]]
-
[[Category: Chung, Y J]]
+
[[Category: Large Structures]]
-
[[Category: Han, Y H]]
+
[[Category: Chung YJ]]
-
[[Category: Gsh binding]]
+
[[Category: Han YH]]
-
[[Category: Transferase]]
+

Current revision

Crystal structure of 26 kDa GST D26H mutant of Clonorchis sinensis

PDB ID 4l5o

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools