5ptm

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:17, 6 March 2024) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
==PanDDA analysis group deposition -- Crystal Structure of BRD1 after initial refinement with no ligand modelled (structure 164)==
==PanDDA analysis group deposition -- Crystal Structure of BRD1 after initial refinement with no ligand modelled (structure 164)==
-
<StructureSection load='5ptm' size='340' side='right' caption='[[5ptm]], [[Resolution|resolution]] 1.41&Aring;' scene=''>
+
<StructureSection load='5ptm' size='340' side='right'caption='[[5ptm]], [[Resolution|resolution]] 1.41&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5ptm]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5PTM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5PTM FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5ptm]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5PTM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5PTM FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.41&#8491;</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ptm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ptm OCA], [http://pdbe.org/5ptm PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ptm RCSB], [http://www.ebi.ac.uk/pdbsum/5ptm PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5ptm ProSAT]</span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5ptm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ptm OCA], [https://pdbe.org/5ptm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5ptm RCSB], [https://www.ebi.ac.uk/pdbsum/5ptm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5ptm ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/BRD1_HUMAN BRD1_HUMAN]] Component of the MOZ/MORF complex which has a histone H3 acetyltransferase activity.<ref>PMID:16387653</ref> <ref>PMID:21880731</ref>
+
[https://www.uniprot.org/uniprot/BRD1_HUMAN BRD1_HUMAN] Component of the MOZ/MORF complex which has a histone H3 acetyltransferase activity.<ref>PMID:16387653</ref> <ref>PMID:21880731</ref>
 +
 
 +
==See Also==
 +
*[[Bromodomain-containing protein 3D structures|Bromodomain-containing protein 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Arrowsmith, C H]]
+
[[Category: Homo sapiens]]
-
[[Category: Bountra, C]]
+
[[Category: Large Structures]]
-
[[Category: Bradley, A R]]
+
[[Category: Arrowsmith CH]]
-
[[Category: Brandao-Neto, J]]
+
[[Category: Bountra C]]
-
[[Category: Brennan, P E]]
+
[[Category: Bradley AR]]
-
[[Category: Collins, P]]
+
[[Category: Brandao-Neto J]]
-
[[Category: Cox, O]]
+
[[Category: Brennan PE]]
-
[[Category: Delft, F von]]
+
[[Category: Collins P]]
-
[[Category: Dias, A]]
+
[[Category: Cox O]]
-
[[Category: Douangamath, A]]
+
[[Category: Dias A]]
-
[[Category: Edwards, A]]
+
[[Category: Douangamath A]]
-
[[Category: Fairhead, M]]
+
[[Category: Edwards A]]
-
[[Category: Krojer, T]]
+
[[Category: Fairhead M]]
-
[[Category: MacLean, E]]
+
[[Category: Krojer T]]
-
[[Category: Ng, J]]
+
[[Category: MacLean E]]
-
[[Category: Pearce, N M]]
+
[[Category: Ng J]]
-
[[Category: Renjie, Z]]
+
[[Category: Pearce NM]]
-
[[Category: Sethi, R]]
+
[[Category: Renjie Z]]
-
[[Category: Talon, R]]
+
[[Category: Sethi R]]
-
[[Category: Wright, N]]
+
[[Category: Talon R]]
-
[[Category: Bromodomain]]
+
[[Category: Wright N]]
-
[[Category: Epigenetic]]
+
[[Category: Von Delft F]]
-
[[Category: Gene regulation]]
+
-
[[Category: Pandda]]
+
-
[[Category: Sgc - diamond i04-1 fragment screening]]
+
-
[[Category: Xchemexplorer]]
+

Current revision

PanDDA analysis group deposition -- Crystal Structure of BRD1 after initial refinement with no ligand modelled (structure 164)

PDB ID 5ptm

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools