This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
5v3f
From Proteopedia
(Difference between revisions)
| (3 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | '''Unreleased structure''' | ||
| - | + | ==Co-crystal structure of the fluorogenic RNA Mango== | |
| - | + | <StructureSection load='5v3f' size='340' side='right'caption='[[5v3f]], [[Resolution|resolution]] 1.70Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[5v3f]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5V3F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5V3F FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7Å</td></tr> | |
| - | [[Category: | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=74G:4-{[(2S)-3-{2,16-DIOXO-20-[(3AS,4S,6AR)-2-OXOHEXAHYDRO-1H-THIENO[3,4-D]IMIDAZOL-4-YL]-6,9,12-TRIOXA-3,15-DIAZAICOSAN-1-YL}-2,3-DIHYDRO-1,3-BENZOTHIAZOL-2-YL]METHYL}-1-METHYLQUINOLIN-1-IUM'>74G</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr> |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5v3f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5v3f OCA], [https://pdbe.org/5v3f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5v3f RCSB], [https://www.ebi.ac.uk/pdbsum/5v3f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5v3f ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Synthetic construct]] | ||
| + | [[Category: Ferre-D'Amare AR]] | ||
| + | [[Category: Trachman RJ]] | ||
Current revision
Co-crystal structure of the fluorogenic RNA Mango
| |||||||||||
