This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5mx4

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (17:52, 8 November 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Crystal structure of H. pylori purine nucleoside phosphorylase from clinical isolate HpPNP-1==
==Crystal structure of H. pylori purine nucleoside phosphorylase from clinical isolate HpPNP-1==
-
<StructureSection load='5mx4' size='340' side='right' caption='[[5mx4]], [[Resolution|resolution]] 2.31&Aring;' scene=''>
+
<StructureSection load='5mx4' size='340' side='right'caption='[[5mx4]], [[Resolution|resolution]] 2.31&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5mx4]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Helicobacter_pylori_r018c Helicobacter pylori r018c]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5MX4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5MX4 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5mx4]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Helicobacter_pylori_R018c Helicobacter pylori R018c]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5MX4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5MX4 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HPA:HYPOXANTHINE'>HPA</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.31&#8491;</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Purine-nucleoside_phosphorylase Purine-nucleoside phosphorylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.2.1 2.4.2.1] </span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HPA:HYPOXANTHINE'>HPA</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5mx4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5mx4 OCA], [http://pdbe.org/5mx4 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5mx4 RCSB], [http://www.ebi.ac.uk/pdbsum/5mx4 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5mx4 ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5mx4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5mx4 OCA], [https://pdbe.org/5mx4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5mx4 RCSB], [https://www.ebi.ac.uk/pdbsum/5mx4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5mx4 ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/K2JXG0_HELPX K2JXG0_HELPX]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 17: Line 19:
</div>
</div>
<div class="pdbe-citations 5mx4" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 5mx4" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Purine nucleoside phosphorylase 3D structures|Purine nucleoside phosphorylase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Helicobacter pylori r018c]]
+
[[Category: Helicobacter pylori R018c]]
-
[[Category: Purine-nucleoside phosphorylase]]
+
[[Category: Large Structures]]
-
[[Category: Stefanic, Z]]
+
[[Category: Stefanic Z]]
-
[[Category: Clinical isolate]]
+
-
[[Category: Dead-end-complex]]
+
-
[[Category: Helicobacter pylori]]
+
-
[[Category: Purine nucleoside phosphorylase]]
+
-
[[Category: Transferase]]
+

Current revision

Crystal structure of H. pylori purine nucleoside phosphorylase from clinical isolate HpPNP-1

PDB ID 5mx4

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/5mx4"
Personal tools