5gm9

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'''Unreleased structure'''
 
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The entry 5gm9 is ON HOLD until Jul 13 2018
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==Crystal structure of a glycoside hydrolase in complex with cellobiose==
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<StructureSection load='5gm9' size='340' side='right'caption='[[5gm9]], [[Resolution|resolution]] 1.36&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[5gm9]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermothielavioides_terrestris_NRRL_8126 Thermothielavioides terrestris NRRL 8126]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5GM9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5GM9 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.36&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=PRD_900005:beta-cellobiose'>PRD_900005</scene>, <scene name='pdbligand=PRD_900023:alpha-cellobiose'>PRD_900023</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5gm9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5gm9 OCA], [https://pdbe.org/5gm9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5gm9 RCSB], [https://www.ebi.ac.uk/pdbsum/5gm9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5gm9 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/G2QVH7_THETT G2QVH7_THETT]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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1,4-beta-Endoglucanase is one of the most important biocatalysts in modern industries. Here, a glycoside hydrolase (GH) family 45 endoglucanase from thermophilic fungus Theilavia terrestris (TtCel45A) was expressed in Pichia pastoris. The recombinant protein shows optimal activity at 60 degrees C, pH 4-5. The enzyme exhibits extraordinary thermostability that more than 80% activity was detected after heating at 80 degrees C for 2.5h. The high resolution crystal structures of apo-form enzyme and that in complex with cellobiose and cellotetraose were solved to 1.36-1.58A. The protein folds into two overall regions: one is a six-stranded beta-barrel, and the other one consists of several extended loops. Between the two regions lies the substrate-binding channel, which is an open cleft spanning across the protein surface. A continuous substrate-binding cleft from subsite -4 to +3 were clearly identified in the complex structures. Notably, the flexible V-VI loop (113Gly-114Gly-115Asp-116Leu-117Gly-118Ser) is found to open in the presence of -1 sugar, with D115 and L116 swung away to yield a space to accommodate the catalytic acid D122 and the 2,5B boat conformation of -1 sugar during transition state. Collectively, we characterized the enzyme properties of P. pastoris-expressed TtCel45A and solved high-resolution crystal structures of the enzyme. These results are of great interests in industrial applications and provide new insights into the fundamental understanding of enzyme catalytic mechanism of GH45 endoglucanases.
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Authors: Gao, J., Liu, W.D., Zheng, Y.Y., Chen, C.C., Guo, R.T.
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Characterization and crystal structure of a thermostable glycoside hydrolase family 45 1,4-beta-endoglucanase from Thielavia terrestris.,Gao J, Huang JW, Li Q, Liu W, Ko TP, Zheng Y, Xiao X, Kuo CJ, Chen CC, Guo RT Enzyme Microb Technol. 2017 Apr;99:32-37. doi: 10.1016/j.enzmictec.2017.01.005., Epub 2017 Jan 17. PMID:28193329<ref>PMID:28193329</ref>
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Description: Crystal structure of a glycoside hydrolase in complex with cellobiose
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Chen, C.C]]
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<div class="pdbe-citations 5gm9" style="background-color:#fffaf0;"></div>
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[[Category: Liu, W.D]]
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== References ==
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[[Category: Guo, R.T]]
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<references/>
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[[Category: Gao, J]]
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__TOC__
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[[Category: Zheng, Y.Y]]
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Thermothielavioides terrestris NRRL 8126]]
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[[Category: Chen CC]]
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[[Category: Gao J]]
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[[Category: Guo RT]]
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[[Category: Liu WD]]
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[[Category: Zheng YY]]

Current revision

Crystal structure of a glycoside hydrolase in complex with cellobiose

PDB ID 5gm9

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