5gm9
From Proteopedia
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- | '''Unreleased structure''' | ||
- | + | ==Crystal structure of a glycoside hydrolase in complex with cellobiose== | |
+ | <StructureSection load='5gm9' size='340' side='right'caption='[[5gm9]], [[Resolution|resolution]] 1.36Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[5gm9]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermothielavioides_terrestris_NRRL_8126 Thermothielavioides terrestris NRRL 8126]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5GM9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5GM9 FirstGlance]. <br> | ||
+ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.36Å</td></tr> | ||
+ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=PRD_900005:beta-cellobiose'>PRD_900005</scene>, <scene name='pdbligand=PRD_900023:alpha-cellobiose'>PRD_900023</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5gm9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5gm9 OCA], [https://pdbe.org/5gm9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5gm9 RCSB], [https://www.ebi.ac.uk/pdbsum/5gm9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5gm9 ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/G2QVH7_THETT G2QVH7_THETT] | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | 1,4-beta-Endoglucanase is one of the most important biocatalysts in modern industries. Here, a glycoside hydrolase (GH) family 45 endoglucanase from thermophilic fungus Theilavia terrestris (TtCel45A) was expressed in Pichia pastoris. The recombinant protein shows optimal activity at 60 degrees C, pH 4-5. The enzyme exhibits extraordinary thermostability that more than 80% activity was detected after heating at 80 degrees C for 2.5h. The high resolution crystal structures of apo-form enzyme and that in complex with cellobiose and cellotetraose were solved to 1.36-1.58A. The protein folds into two overall regions: one is a six-stranded beta-barrel, and the other one consists of several extended loops. Between the two regions lies the substrate-binding channel, which is an open cleft spanning across the protein surface. A continuous substrate-binding cleft from subsite -4 to +3 were clearly identified in the complex structures. Notably, the flexible V-VI loop (113Gly-114Gly-115Asp-116Leu-117Gly-118Ser) is found to open in the presence of -1 sugar, with D115 and L116 swung away to yield a space to accommodate the catalytic acid D122 and the 2,5B boat conformation of -1 sugar during transition state. Collectively, we characterized the enzyme properties of P. pastoris-expressed TtCel45A and solved high-resolution crystal structures of the enzyme. These results are of great interests in industrial applications and provide new insights into the fundamental understanding of enzyme catalytic mechanism of GH45 endoglucanases. | ||
- | + | Characterization and crystal structure of a thermostable glycoside hydrolase family 45 1,4-beta-endoglucanase from Thielavia terrestris.,Gao J, Huang JW, Li Q, Liu W, Ko TP, Zheng Y, Xiao X, Kuo CJ, Chen CC, Guo RT Enzyme Microb Technol. 2017 Apr;99:32-37. doi: 10.1016/j.enzmictec.2017.01.005., Epub 2017 Jan 17. PMID:28193329<ref>PMID:28193329</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | [[Category: | + | </div> |
- | [[Category: Chen | + | <div class="pdbe-citations 5gm9" style="background-color:#fffaf0;"></div> |
- | [[Category: | + | == References == |
- | [[Category: Guo | + | <references/> |
- | [[Category: | + | __TOC__ |
- | [[Category: Zheng | + | </StructureSection> |
+ | [[Category: Large Structures]] | ||
+ | [[Category: Thermothielavioides terrestris NRRL 8126]] | ||
+ | [[Category: Chen CC]] | ||
+ | [[Category: Gao J]] | ||
+ | [[Category: Guo RT]] | ||
+ | [[Category: Liu WD]] | ||
+ | [[Category: Zheng YY]] |
Current revision
Crystal structure of a glycoside hydrolase in complex with cellobiose
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