5vc7
From Proteopedia
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| - | '''Unreleased structure''' | ||
| - | + | ==VCP like ATPase from T. acidophilum (VAT) - conformation 1== | |
| + | <SX load='5vc7' size='340' side='right' viewer='molstar' caption='[[5vc7]], [[Resolution|resolution]] 3.90Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[5vc7]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermoplasma_acidophilum_DSM_1728 Thermoplasma acidophilum DSM 1728]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5VC7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5VC7 FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.9Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5vc7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5vc7 OCA], [https://pdbe.org/5vc7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5vc7 RCSB], [https://www.ebi.ac.uk/pdbsum/5vc7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5vc7 ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/VAT_THEAC VAT_THEAC] | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | AAA+ unfoldases are thought to unfold substrate through the central pore of their hexameric structures, but how this process occurs is not known. VAT, the Thermoplasma acidophilum homologue of eukaryotic CDC48/p97, works in conjunction with the proteasome to degrade misfolded or damaged proteins. We show that in the presence of ATP, VAT with its regulatory N-terminal domains removed unfolds other VAT complexes as substrate. We captured images of this transient process by electron cryomicroscopy (cryo-EM) to reveal the structure of the substrate-bound intermediate. Substrate binding breaks the six-fold symmetry of the complex, allowing five of the six VAT subunits to constrict into a tight helix that grips an ~80 A stretch of unfolded protein. The structure suggests a processive hand-over-hand unfolding mechanism, where each VAT subunit releases the substrate in turn before re-engaging further along the target protein, thereby unfolding it. | ||
| - | + | Structure of a AAA+ unfoldase in the process of unfolding substrate.,Ripstein ZA, Huang R, Augustyniak R, Kay LE, Rubinstein JL Elife. 2017 Apr 8;6. pii: e25754. doi: 10.7554/eLife.25754. PMID:28390173<ref>PMID:28390173</ref> | |
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
| - | [[Category: | + | </div> |
| + | <div class="pdbe-citations 5vc7" style="background-color:#fffaf0;"></div> | ||
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </SX> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Thermoplasma acidophilum DSM 1728]] | ||
| + | [[Category: Augustyniak R]] | ||
| + | [[Category: Huang R]] | ||
| + | [[Category: Kay LE]] | ||
| + | [[Category: Ripstein ZA]] | ||
| + | [[Category: Rubinstein JL]] | ||
Current revision
VCP like ATPase from T. acidophilum (VAT) - conformation 1
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