|  |   | 
		| (2 intermediate revisions not shown.) | 
| Line 1: | Line 1: | 
|  |  |  |  | 
|  | ==The crystal structure of the seventh ScaB type I cohesin from Pseudobacteroides cellulosolvens== |  | ==The crystal structure of the seventh ScaB type I cohesin from Pseudobacteroides cellulosolvens== | 
| - | <StructureSection load='4ums' size='340' side='right' caption='[[4ums]], [[Resolution|resolution]] 1.84Å' scene=''> | + | <StructureSection load='4ums' size='340' side='right'caption='[[4ums]], [[Resolution|resolution]] 1.84Å' scene=''> | 
|  | == Structural highlights == |  | == Structural highlights == | 
| - | <table><tr><td colspan='2'>[[4ums]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4UMS OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4UMS FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[4ums]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudobacteroides_cellulosolvens Pseudobacteroides cellulosolvens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4UMS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4UMS FirstGlance]. <br> | 
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ums FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ums OCA], [http://pdbe.org/4ums PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4ums RCSB], [http://www.ebi.ac.uk/pdbsum/4ums PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4ums ProSAT]</span></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.84Å</td></tr> | 
|  | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ums FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ums OCA], [https://pdbe.org/4ums PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ums RCSB], [https://www.ebi.ac.uk/pdbsum/4ums PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ums ProSAT]</span></td></tr> | 
|  | </table> |  | </table> | 
|  | + | == Function == | 
|  | + | [https://www.uniprot.org/uniprot/Q6A564_9FIRM Q6A564_9FIRM]  | 
|  | <div style="background-color:#fffaf0;"> |  | <div style="background-color:#fffaf0;"> | 
|  | == Publication Abstract from PubMed == |  | == Publication Abstract from PubMed == | 
| Line 19: | Line 22: | 
|  | __TOC__ |  | __TOC__ | 
|  | </StructureSection> |  | </StructureSection> | 
| - | [[Category: Alves, V D]] | + | [[Category: Large Structures]] | 
| - | [[Category: Cameron, K]] | + | [[Category: Pseudobacteroides cellulosolvens]] | 
| - | [[Category: Ferreira, L M.A]] | + | [[Category: Alves VD]] | 
| - | [[Category: Fontes, C M.G A]] | + | [[Category: Cameron K]] | 
| - | [[Category: Najmudin, S]] | + | [[Category: Ferreira LMA]] | 
| - | [[Category: Cellulosome]] | + | [[Category: Fontes CMGA]] | 
| - | [[Category: Cohesin]] | + | [[Category: Najmudin S]] | 
| - | [[Category: Dockerin]]
 | + |  | 
| - | [[Category: Structural protein]]
 | + |  | 
| - | [[Category: Type i binding scaffoldin scab]]
 | + |  | 
|  |   Structural highlights   Function Q6A564_9FIRM 
 
  Publication Abstract from PubMed Cohesin-dockerin interactions orchestrate the assembly of one of nature's most elaborate multi-enzyme complexes, the cellulosome. Cellulosomes are produced exclusively by anaerobic microbes and mediate highly efficient hydrolysis of plant structural polysaccharides, such as cellulose and hemicellulose. In the canonical model of cellulosome assembly, type-I dockerin modules of the enzymes bind to reiterated type-I cohesin modules of a primary scaffoldin. Each type-I dockerin contains two highly conserved cohesin-binding sites, which confer quaternary flexibility to the multienzyme complex. The scaffoldin also bears a type-II dockerin that anchors the entire complex to the cell surface by binding type-II cohesins of anchoring scaffoldins. In Bacteroides cellulosolvens, however, the organisation of the cohesin-dockerin types is reversed, whereby type-II cohesin-dockerin pairs integrate the enzymes into the primary scaffoldin and type-I modules mediate cellulosome attachment to an anchoring scaffoldin. Here we report the crystal structure of a type-I cohesin from B. cellulosolvens anchoring scaffoldin ScaB, to 1.84-A resolution. The structure resembles other type-I cohesins, and the putative dockerin-binding site, centred at beta;-strands 3, 5 and 6, is likely to be conserved in other B. cellulosolvens type-I cohesins. Combined computational modelling, mutagenesis and affinity-based binding studies revealed similar hydrogen-bonding networks between putative Ser/Asp recognition residues, in the dockerin at positions 11/12 and 45/46, suggesting that a dual-binding mode is not exclusive to the integration of enzymes into primary cellulosomes but can also characterise polycellulosome assembly and cell-surface attachment. This general approach may provide valuable structural information of the cohesin-dockerin interface, in lieu of a definitive crystal structure.
 Combined crystal structure of a type-I cohesin, mutation and affinity-binding studies reveal structural determinants of cohesin-dockerin specificity.,Cameron K, Weinstein JY, Zhivin O, Bule P, Fleishman SJ, Alves VD, Gilbert HJ, Ferreira LM, Fontes CM, Bayer EA, Najmudin S J Biol Chem. 2015 May 1. pii: jbc.M115.653303. PMID:25934389[1]
 From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
   References ↑ Cameron K, Weinstein JY, Zhivin O, Bule P, Fleishman SJ, Alves VD, Gilbert HJ, Ferreira LM, Fontes CM, Bayer EA, Najmudin S. Combined crystal structure of a type-I cohesin, mutation and affinity-binding studies reveal structural determinants of cohesin-dockerin specificity. J Biol Chem. 2015 May 1. pii: jbc.M115.653303. PMID:25934389 doi:http://dx.doi.org/10.1074/jbc.M115.653303
 
 |