5vj4

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m (Protected "5vj4" [edit=sysop:move=sysop])
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'''Unreleased structure'''
 
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The entry 5vj4 is ON HOLD until Paper Publication
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==Crystal structure of a putative surface protein encoded by BTA121==
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<StructureSection load='5vj4' size='340' side='right'caption='[[5vj4]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[5vj4]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Borrelia_turicatae_91E135 Borrelia turicatae 91E135]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5VJ4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5VJ4 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5vj4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5vj4 OCA], [https://pdbe.org/5vj4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5vj4 RCSB], [https://www.ebi.ac.uk/pdbsum/5vj4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5vj4 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/A0A0R9P931_BORT9 A0A0R9P931_BORT9]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Tick-borne relapsing fever (RF) borreliosis is a neglected disease that is often misdiagnosed. RF species circulating in the United States include Borrelia turicatae, which is transmitted by argasid ticks. Environmental adaptation by RF Borrelia is poorly understood, however our previous studies indicated differential regulation of B. turicatae genes localized on the 150 kb linear megaplasmid during the tick-mammalian transmission cycle, including bta121. This gene is up-regulated by B. turicatae in the tick versus the mammal, and the encoded protein (BTA121) is predicted to be surface localized. The structure of BTA121 was solved by single-wavelength anomalous dispersion (SAD) using selenomethionine-derivative protein. The topology of BTA121 is unique with four helical domains organized into two helical bundles. Due to the sequence similarity of several genes on the megaplasmid, BTA121 can serve as a model for their tertiary structures. BTA121 has large interconnected tunnels and cavities that can accommodate ligands, notably long parallel helices, which have a large hydrophobic central pocket. Preliminary in-vitro studies suggest that BTA121 binds lipids, notably palmitate with a similar order of binding affinity as tablysin-15, a known palmitate-binding protein. The reported data will guide mechanistic studies to determine the role of BTA121 in the tick-mammalian transmission cycle of B. turicatae.
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Authors: Luo, Z., Asojo, O.
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Crystal Structure of Borrelia turicatae protein, BTA121, a differentially regulated gene in the tick-mammalian transmission cycle of relapsing fever spirochetes.,Luo Z, Kelleher AJ, Darwiche R, Hudspeth EM, Shittu OK, Krishnavajhala A, Schneiter R, Lopez JE, Asojo OA Sci Rep. 2017 Nov 10;7(1):15310. doi: 10.1038/s41598-017-14959-9. PMID:29127407<ref>PMID:29127407</ref>
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Description: Crystal structure of a putative surface protein encoded by BTA121
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Asojo, O]]
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<div class="pdbe-citations 5vj4" style="background-color:#fffaf0;"></div>
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[[Category: Luo, Z]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Borrelia turicatae 91E135]]
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[[Category: Large Structures]]
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[[Category: Asojo O]]
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[[Category: Luo Z]]

Current revision

Crystal structure of a putative surface protein encoded by BTA121

PDB ID 5vj4

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