This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5twj

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:14, 4 October 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Crystal Structure of RlmH in Complex with S-Adenosylmethionine==
==Crystal Structure of RlmH in Complex with S-Adenosylmethionine==
-
<StructureSection load='5twj' size='340' side='right' caption='[[5twj]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
+
<StructureSection load='5twj' size='340' side='right'caption='[[5twj]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5twj]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5TWJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5TWJ FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5twj]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5TWJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5TWJ FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SAM:S-ADENOSYLMETHIONINE'>SAM</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.299&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5twk|5twk]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SAM:S-ADENOSYLMETHIONINE'>SAM</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/23S_rRNA_(pseudouridine(1915)-N(3))-methyltransferase 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.1.1.177 2.1.1.177] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5twj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5twj OCA], [https://pdbe.org/5twj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5twj RCSB], [https://www.ebi.ac.uk/pdbsum/5twj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5twj ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5twj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5twj OCA], [http://pdbe.org/5twj PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5twj RCSB], [http://www.ebi.ac.uk/pdbsum/5twj PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5twj ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/RLMH_ECO45 RLMH_ECO45]] Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA.
+
[https://www.uniprot.org/uniprot/RLMH_ECOLI RLMH_ECOLI] Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA. Specific for fully assembled 70S ribosomes.<ref>PMID:18755835</ref> <ref>PMID:18755836</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 24: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Beane, T J]]
+
[[Category: Escherichia coli]]
-
[[Category: Koh, C S]]
+
[[Category: Large Structures]]
-
[[Category: Korostelev, A A]]
+
[[Category: Beane TJ]]
-
[[Category: Madireddy, R]]
+
[[Category: Koh CS]]
-
[[Category: Zamore, P D]]
+
[[Category: Korostelev AA]]
-
[[Category: Helix 69]]
+
[[Category: Madireddy R]]
-
[[Category: Pseudouridine]]
+
[[Category: Zamore PD]]
-
[[Category: Rna methyltransferase]]
+
-
[[Category: S-adenosylmethionine]]
+
-
[[Category: Spout]]
+
-
[[Category: Transferase]]
+

Current revision

Crystal Structure of RlmH in Complex with S-Adenosylmethionine

PDB ID 5twj

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/5twj"
Personal tools