This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4wgf

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:42, 10 January 2024) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==YcaC from Pseudomonas aeruginosa with hexane-2,5-diol and covalent acrylamide==
==YcaC from Pseudomonas aeruginosa with hexane-2,5-diol and covalent acrylamide==
-
<StructureSection load='4wgf' size='340' side='right' caption='[[4wgf]], [[Resolution|resolution]] 2.34&Aring;' scene=''>
+
<StructureSection load='4wgf' size='340' side='right'caption='[[4wgf]], [[Resolution|resolution]] 2.34&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4wgf]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4WGF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4WGF FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4wgf]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_PAO1 Pseudomonas aeruginosa PAO1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4WGF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4WGF FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=HX2:(2R,5R)-HEXANE-2,5-DIOL'>HX2</scene>, <scene name='pdbligand=ROP:PROPIONAMIDE'>ROP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3402069&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=HX2:(2R,5R)-HEXANE-2,5-DIOL'>HX2</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=ROP:PROPIONAMIDE'>ROP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4wh0|4wh0]]</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4wgf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4wgf OCA], [https://pdbe.org/4wgf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4wgf RCSB], [https://www.ebi.ac.uk/pdbsum/4wgf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4wgf ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4wgf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4wgf OCA], [http://pdbe.org/4wgf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4wgf RCSB], [http://www.ebi.ac.uk/pdbsum/4wgf PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4wgf ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q9I4D6_PSEAE Q9I4D6_PSEAE]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 22: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Pseudomonas aeruginosa]]
+
[[Category: Large Structures]]
-
[[Category: Denny, P W]]
+
[[Category: Pseudomonas aeruginosa PAO1]]
-
[[Category: Groftehauge, M K]]
+
[[Category: Denny PW]]
-
[[Category: Pohl, E]]
+
[[Category: Groftehauge MK]]
-
[[Category: Truan, D]]
+
[[Category: Pohl E]]
-
[[Category: Vasil, A]]
+
[[Category: Truan D]]
-
[[Category: Vasil, M L]]
+
[[Category: Vasil A]]
-
[[Category: Co-purified]]
+
[[Category: Vasil ML]]
-
[[Category: Contaminant]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Parallel beta-sheet]]
+

Current revision

YcaC from Pseudomonas aeruginosa with hexane-2,5-diol and covalent acrylamide

PDB ID 4wgf

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools