1v6z
From Proteopedia
(Difference between revisions)
| (13 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:1v6z.jpg|left|200px]] | ||
| - | + | ==Crystal structure of TT1573 from Thermus thermophilus== | |
| - | + | <StructureSection load='1v6z' size='340' side='right'caption='[[1v6z]], [[Resolution|resolution]] 2.00Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | | | + | <table><tr><td colspan='2'>[[1v6z]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1V6Z OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1V6Z FirstGlance]. <br> |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2Å</td></tr> | |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1v6z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1v6z OCA], [https://pdbe.org/1v6z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1v6z RCSB], [https://www.ebi.ac.uk/pdbsum/1v6z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1v6z ProSAT], [https://www.topsan.org/Proteins/RSGI/1v6z TOPSAN]</span></td></tr> | |
| - | + | </table> | |
| - | + | == Function == | |
| - | + | [https://www.uniprot.org/uniprot/Q5SKI6_THET8 Q5SKI6_THET8] Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit (By similarity).[PIRNR:PIRNR015601] | |
| - | + | == Evolutionary Conservation == | |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| - | + | Check<jmol> | |
| - | + | <jmolCheckbox> | |
| - | == | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/v6/1v6z_consurf.spt"</scriptWhenChecked> |
| - | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | |
| - | [[Category: | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | [[Category: Thermus thermophilus]] | + | </jmolCheckbox> |
| - | [[Category: Murayama | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1v6z ConSurf]. |
| - | + | <div style="clear:both"></div> | |
| - | [[Category: Shirouzu | + | __TOC__ |
| - | [[Category: Yokoyama | + | </StructureSection> |
| - | + | [[Category: Large Structures]] | |
| - | + | [[Category: Thermus thermophilus HB8]] | |
| - | + | [[Category: Murayama K]] | |
| - | + | [[Category: Shirouzu M]] | |
| - | + | [[Category: Yokoyama S]] | |
Current revision
Crystal structure of TT1573 from Thermus thermophilus
| |||||||||||
