1vr4

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (00:05, 28 December 2023) (edit) (undo)
 
(12 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1vr4.gif|left|200px]]
 
-
{{Structure
+
==Crystal Structure of MCSG TArget APC22750 from Bacillus cereus==
-
|PDB= 1vr4 |SIZE=350|CAPTION= <scene name='initialview01'>1vr4</scene>, resolution 2.09&Aring;
+
<StructureSection load='1vr4' size='340' side='right'caption='[[1vr4]], [[Resolution|resolution]] 2.09&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND=
+
<table><tr><td colspan='2'>[[1vr4]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_cereus_ATCC_14579 Bacillus cereus ATCC 14579]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1ybb 1ybb]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VR4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VR4 FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.09&#8491;</td></tr>
-
|GENE=
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vr4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vr4 OCA], [https://pdbe.org/1vr4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vr4 RCSB], [https://www.ebi.ac.uk/pdbsum/1vr4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vr4 ProSAT], [https://www.topsan.org/Proteins/MCSG/1vr4 TOPSAN]</span></td></tr>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PRK12856 PRK12856]</span>
+
</table>
-
|RELATEDENTRY=
+
== Function ==
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1vr4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vr4 OCA], [http://www.ebi.ac.uk/pdbsum/1vr4 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1vr4 RCSB]</span>
+
[https://www.uniprot.org/uniprot/Y1012_BACCR Y1012_BACCR]
-
}}
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
'''Crystal Structure of MCSG TArget APC22750 from Bacillus cereus'''
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
 
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vr/1vr4_consurf.spt"</scriptWhenChecked>
-
==About this Structure==
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
1VR4 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_cereus Bacillus cereus]. This structure supersedes the now removed PDB entry 1YBB. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VR4 OCA].
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Bacillus cereus]]
+
</jmolCheckbox>
-
[[Category: Single protein]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1vr4 ConSurf].
-
[[Category: Anderson, W F.]]
+
<div style="clear:both"></div>
-
[[Category: Brunzelle, J S.]]
+
__TOC__
-
[[Category: Collart, F R.]]
+
</StructureSection>
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
[[Category: Bacillus cereus ATCC 14579]]
-
[[Category: McNamara, L K.]]
+
[[Category: Large Structures]]
-
[[Category: Minasov, G.]]
+
[[Category: Anderson WF]]
-
[[Category: Shuvalova, L.]]
+
[[Category: Brunzelle JS]]
-
[[Category: Yang, X.]]
+
[[Category: Collart FR]]
-
[[Category: hypothetical protein]]
+
[[Category: McNamara LK]]
-
[[Category: mcsg]]
+
[[Category: Minasov G]]
-
[[Category: pentamer]]
+
[[Category: Shuvalova L]]
-
[[Category: protein structure initiative]]
+
[[Category: Yang X]]
-
[[Category: psi]]
+
-
[[Category: structural genomic]]
+
-
[[Category: the midwest center for structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 00:27:32 2008''
+

Current revision

Crystal Structure of MCSG TArget APC22750 from Bacillus cereus

PDB ID 1vr4

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools