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5vyp

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(New page: ==Crystal structure of the Plant Defensin NsD7 bound to PIP2== <StructureSection load='5vyp' size='340' side='right' caption='5vyp, resolution 2.60&Aring;' scene=''> ==...)
Current revision (14:02, 4 October 2023) (edit) (undo)
 
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==Crystal structure of the Plant Defensin NsD7 bound to PIP2==
==Crystal structure of the Plant Defensin NsD7 bound to PIP2==
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<StructureSection load='5vyp' size='340' side='right' caption='[[5vyp]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
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<StructureSection load='5vyp' size='340' side='right'caption='[[5vyp]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5vyp]] is a 24 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5VYP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5VYP FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5vyp]] is a 24 chain structure with sequence from [https://en.wikipedia.org/wiki/Nicotiana_suaveolens Nicotiana suaveolens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5VYP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5VYP FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PIO:[(2R)-2-OCTANOYLOXY-3-[OXIDANYL-[(1R,2R,3S,4R,5R,6S)-2,3,6-TRIS(OXIDANYL)-4,5-DIPHOSPHONOOXY-CYCLOHEXYL]OXY-PHOSPHORYL]OXY-PROPYL]+OCTANOATE'>PIO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5vyp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5vyp OCA], [http://pdbe.org/5vyp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5vyp RCSB], [http://www.ebi.ac.uk/pdbsum/5vyp PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5vyp ProSAT]</span></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PIO:[(2R)-2-OCTANOYLOXY-3-[OXIDANYL-[(1R,2R,3S,4R,5R,6S)-2,3,6-TRIS(OXIDANYL)-4,5-DIPHOSPHONOOXY-CYCLOHEXYL]OXY-PHOSPHORYL]OXY-PROPYL]+OCTANOATE'>PIO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5vyp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5vyp OCA], [https://pdbe.org/5vyp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5vyp RCSB], [https://www.ebi.ac.uk/pdbsum/5vyp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5vyp ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/DEF_NICSU DEF_NICSU]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</div>
</div>
<div class="pdbe-citations 5vyp" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 5vyp" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Defensin 3D structures|Defensin 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Hulett, M]]
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[[Category: Large Structures]]
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[[Category: Jarva, M]]
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[[Category: Nicotiana suaveolens]]
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[[Category: Kvansakul, M]]
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[[Category: Hulett M]]
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[[Category: Lay, F T]]
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[[Category: Jarva M]]
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[[Category: Antifungal]]
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[[Category: Kvansakul M]]
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[[Category: Antimicrobial]]
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[[Category: Lay FT]]
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[[Category: Antimicrobial protein]]
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[[Category: Defensin]]
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Crystal structure of the Plant Defensin NsD7 bound to PIP2

PDB ID 5vyp

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