1bmv

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:19, 22 May 2024) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
==PROTEIN-RNA INTERACTIONS IN AN ICOSAHEDRAL VIRUS AT 3.0 ANGSTROMS RESOLUTION==
==PROTEIN-RNA INTERACTIONS IN AN ICOSAHEDRAL VIRUS AT 3.0 ANGSTROMS RESOLUTION==
-
<StructureSection load='1bmv' size='340' side='right' caption='[[1bmv]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
+
<StructureSection load='1bmv' size='340' side='right'caption='[[1bmv]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1bmv]] is a 3 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BMV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1BMV FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1bmv]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Bean_pod_mottle_virus Bean pod mottle virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BMV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1BMV FirstGlance]. <br>
-
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1bmv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bmv OCA], [http://pdbe.org/1bmv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1bmv RCSB], [http://www.ebi.ac.uk/pdbsum/1bmv PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1bmv ProSAT]</span></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3&#8491;</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1bmv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bmv OCA], [https://pdbe.org/1bmv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1bmv RCSB], [https://www.ebi.ac.uk/pdbsum/1bmv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1bmv ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/POL2_BPMV POL2_BPMV]] Movement protein: transports viral genome to neighboring plant cells directly through plasmosdesmata, without any budding. The movement protein allows efficient cell to cell propagation, by bypassing the host cell wall barrier. Acts by forming a tubular structure at the host plasmodesmata, enlarging it enough to allow free passage of virion capsids (By similarity).
+
[https://www.uniprot.org/uniprot/POL2_BPMV POL2_BPMV] Movement protein: transports viral genome to neighboring plant cells directly through plasmosdesmata, without any budding. The movement protein allows efficient cell to cell propagation, by bypassing the host cell wall barrier. Acts by forming a tubular structure at the host plasmodesmata, enlarging it enough to allow free passage of virion capsids (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bm/1bmv_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bm/1bmv_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
Line 29: Line 30:
==See Also==
==See Also==
-
*[[Virus coat protein|Virus coat protein]]
+
*[[Virus coat proteins 3D structures|Virus coat proteins 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Bomu, W]]
+
[[Category: Bean pod mottle virus]]
-
[[Category: Chen, Z]]
+
[[Category: Large Structures]]
-
[[Category: Johnson, J E]]
+
[[Category: Bomu W]]
-
[[Category: Kamer, G]]
+
[[Category: Chen Z]]
-
[[Category: Li, Y]]
+
[[Category: Johnson JE]]
-
[[Category: Lomonossoff, G]]
+
[[Category: Kamer G]]
-
[[Category: Schmidt, T]]
+
[[Category: Li Y]]
-
[[Category: Shanks, M]]
+
[[Category: Lomonossoff G]]
-
[[Category: Stauffacher, C]]
+
[[Category: Schmidt T]]
-
[[Category: Icosahedral virus]]
+
[[Category: Shanks M]]
-
[[Category: Protein-rna complex]]
+
[[Category: Stauffacher C]]
-
[[Category: Single strand]]
+
-
[[Category: Virus-rna complex]]
+

Current revision

PROTEIN-RNA INTERACTIONS IN AN ICOSAHEDRAL VIRUS AT 3.0 ANGSTROMS RESOLUTION

PDB ID 1bmv

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1bmv"
Personal tools