This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5wrj

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (16:51, 8 November 2023) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==Crystal structure of human tyrosylprotein sulfotransferase-1 complexed with PAP and gastrin peptide==
==Crystal structure of human tyrosylprotein sulfotransferase-1 complexed with PAP and gastrin peptide==
-
<StructureSection load='5wrj' size='340' side='right' caption='[[5wrj]], [[Resolution|resolution]] 2.31&Aring;' scene=''>
+
<StructureSection load='5wrj' size='340' side='right'caption='[[5wrj]], [[Resolution|resolution]] 2.31&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5wrj]] is a 8 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5WRJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5WRJ FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5wrj]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5WRJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5WRJ FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=A3P:ADENOSINE-3-5-DIPHOSPHATE'>A3P</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.31&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5wri|5wri]], [[3ap1|3ap1]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=A3P:ADENOSINE-3-5-DIPHOSPHATE'>A3P</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Protein-tyrosine_sulfotransferase Protein-tyrosine sulfotransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.8.2.20 2.8.2.20] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5wrj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5wrj OCA], [https://pdbe.org/5wrj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5wrj RCSB], [https://www.ebi.ac.uk/pdbsum/5wrj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5wrj ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5wrj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5wrj OCA], [http://pdbe.org/5wrj PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5wrj RCSB], [http://www.ebi.ac.uk/pdbsum/5wrj PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5wrj ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/TPST1_HUMAN TPST1_HUMAN]] Catalyzes the O-sulfation of tyrosine residues within acidic motifs of polypeptides.
+
[https://www.uniprot.org/uniprot/TPST1_HUMAN TPST1_HUMAN] Catalyzes the O-sulfation of tyrosine residues within acidic motifs of polypeptides.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 20: Line 19:
</div>
</div>
<div class="pdbe-citations 5wrj" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 5wrj" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Sulfotransferase 3D structures|Sulfotransferase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Protein-tyrosine sulfotransferase]]
+
[[Category: Homo sapiens]]
-
[[Category: Kakuta, Y]]
+
[[Category: Large Structures]]
-
[[Category: Kojo, H]]
+
[[Category: Synthetic construct]]
-
[[Category: Nishiyori, T]]
+
[[Category: Kakuta Y]]
-
[[Category: Otsubo, R]]
+
[[Category: Kojo H]]
-
[[Category: Tanaka, S]]
+
[[Category: Nishiyori T]]
-
[[Category: Transferase]]
+
[[Category: Otsubo R]]
 +
[[Category: Tanaka S]]

Current revision

Crystal structure of human tyrosylprotein sulfotransferase-1 complexed with PAP and gastrin peptide

PDB ID 5wrj

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools