1g38

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:07, 9 August 2023) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==ADENINE-SPECIFIC METHYLTRANSFERASE M. TAQ I/DNA COMPLEX==
==ADENINE-SPECIFIC METHYLTRANSFERASE M. TAQ I/DNA COMPLEX==
-
<StructureSection load='1g38' size='340' side='right' caption='[[1g38]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
+
<StructureSection load='1g38' size='340' side='right'caption='[[1g38]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1g38]] is a 6 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1G38 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1G38 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1g38]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_aquaticus Thermus aquaticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1G38 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1G38 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NEA:5-DEOXY-5-[2-(AMINO)ETHYLTHIO]ADENOSINE'>NEA</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=6MA:N6-METHYL-DEOXY-ADENOSINE-5-MONOPHOSPHATE'>6MA</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=6MA:N6-METHYL-DEOXY-ADENOSINE-5-MONOPHOSPHATE'>6MA</scene>, <scene name='pdbligand=NEA:5-DEOXY-5-[2-(AMINO)ETHYLTHIO]ADENOSINE'>NEA</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2adm|2adm]]</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1g38 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1g38 OCA], [https://pdbe.org/1g38 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1g38 RCSB], [https://www.ebi.ac.uk/pdbsum/1g38 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1g38 ProSAT]</span></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Site-specific_DNA-methyltransferase_(adenine-specific) Site-specific DNA-methyltransferase (adenine-specific)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.1.1.72 2.1.1.72] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1g38 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1g38 OCA], [http://pdbe.org/1g38 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1g38 RCSB], [http://www.ebi.ac.uk/pdbsum/1g38 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1g38 ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/MTTA_THEAQ MTTA_THEAQ]] This methylase recognizes the double-stranded sequence TCGA, causes specific methylation on A-4 on both strands and protects the DNA from cleavage by the TaqI endonuclease.
+
[https://www.uniprot.org/uniprot/MTTA_THEAQ MTTA_THEAQ] This methylase recognizes the double-stranded sequence TCGA, causes specific methylation on A-4 on both strands and protects the DNA from cleavage by the TaqI endonuclease.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/g3/1g38_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/g3/1g38_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
Line 33: Line 31:
==See Also==
==See Also==
-
*[[DNA methyltransferase|DNA methyltransferase]]
+
*[[DNA methyltransferase 3D structures|DNA methyltransferase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Goedecke, K]]
+
[[Category: Large Structures]]
-
[[Category: Goody, R S]]
+
[[Category: Thermus aquaticus]]
-
[[Category: Pignot, M]]
+
[[Category: Goedecke K]]
-
[[Category: Scheidig, A J]]
+
[[Category: Goody RS]]
-
[[Category: Weinhold, E]]
+
[[Category: Pignot M]]
-
[[Category: Dna]]
+
[[Category: Scheidig AJ]]
-
[[Category: Methyltransferase]]
+
[[Category: Weinhold E]]
-
[[Category: Restriction system]]
+
-
[[Category: Transferase]]
+
-
[[Category: Transferase-dna complex]]
+

Current revision

ADENINE-SPECIFIC METHYLTRANSFERASE M. TAQ I/DNA COMPLEX

PDB ID 1g38

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1g38"
Personal tools