This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5x4a

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:53, 22 November 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==SLL-2-Forssman antigen tetrasaccharides complex==
==SLL-2-Forssman antigen tetrasaccharides complex==
-
<StructureSection load='5x4a' size='340' side='right' caption='[[5x4a]], [[Resolution|resolution]] 3.40&Aring;' scene=''>
+
<StructureSection load='5x4a' size='340' side='right'caption='[[5x4a]], [[Resolution|resolution]] 3.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5x4a]] is a 12 chain structure with sequence from [http://en.wikipedia.org/wiki/Sinularia_lochmodes Sinularia lochmodes]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5X4A OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5X4A FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5x4a]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Sinularia_lochmodes Sinularia lochmodes]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5X4A OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5X4A FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=A2G:N-ACETYL-2-DEOXY-2-AMINO-GALACTOSE'>A2G</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=GLA:ALPHA+D-GALACTOSE'>GLA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=NGA:N-ACETYL-D-GALACTOSAMINE'>NGA</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.4&#8491;</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5x4a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5x4a OCA], [http://pdbe.org/5x4a PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5x4a RCSB], [http://www.ebi.ac.uk/pdbsum/5x4a PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5x4a ProSAT]</span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=A2G:N-ACETYL-2-DEOXY-2-AMINO-GALACTOSE'>A2G</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=GLA:ALPHA+D-GALACTOSE'>GLA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=NGA:N-ACETYL-D-GALACTOSAMINE'>NGA</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5x4a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5x4a OCA], [https://pdbe.org/5x4a PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5x4a RCSB], [https://www.ebi.ac.uk/pdbsum/5x4a PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5x4a ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/A4CYJ6_9CNID A4CYJ6_9CNID]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 16: Line 19:
</div>
</div>
<div class="pdbe-citations 5x4a" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 5x4a" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Galactose-binding lectin|Galactose-binding lectin]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Sinularia lochmodes]]
[[Category: Sinularia lochmodes]]
-
[[Category: Kita, A]]
+
[[Category: Kita A]]
-
[[Category: Miki, K]]
+
[[Category: Miki K]]
-
[[Category: Coral lectin]]
+
-
[[Category: Forssman antigen tetrasaccharide]]
+
-
[[Category: Sll-2]]
+
-
[[Category: Sugar binding protein]]
+
-
[[Category: Symbiosis]]
+

Current revision

SLL-2-Forssman antigen tetrasaccharides complex

PDB ID 5x4a

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools