1wv2

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:34, 13 March 2024) (edit) (undo)
 
(14 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1wv2.gif|left|200px]]
 
-
{{Structure
+
==Crystal structure of thiamine biosynthesis protein from Pseudomonas Aeruginosa==
-
|PDB= 1wv2 |SIZE=350|CAPTION= <scene name='initialview01'>1wv2</scene>, resolution 2.9&Aring;
+
<StructureSection load='1wv2' size='340' side='right'caption='[[1wv2]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND=
+
<table><tr><td colspan='2'>[[1wv2]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WV2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1WV2 FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9&#8491;</td></tr>
-
|GENE=
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1wv2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wv2 OCA], [https://pdbe.org/1wv2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1wv2 RCSB], [https://www.ebi.ac.uk/pdbsum/1wv2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1wv2 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/1wv2 TOPSAN]</span></td></tr>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd04728 ThiG]</span>
+
</table>
-
|RELATEDENTRY=
+
== Function ==
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1wv2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wv2 OCA], [http://www.ebi.ac.uk/pdbsum/1wv2 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1wv2 RCSB]</span>
+
[https://www.uniprot.org/uniprot/THIG_PSEAE THIG_PSEAE] Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S (By similarity).
-
}}
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
'''Crystal structure of thiamine biosynthesis protein from Pseudomonas Aeruginosa'''
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
 
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wv/1wv2_consurf.spt"</scriptWhenChecked>
-
==About this Structure==
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
1WV2 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WV2 OCA].
+
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1wv2 ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Pseudomonas aeruginosa]]
[[Category: Pseudomonas aeruginosa]]
-
[[Category: Single protein]]
+
[[Category: Almo SC]]
-
[[Category: Almo, S C.]]
+
[[Category: Burley SK]]
-
[[Category: Burley, S K.]]
+
[[Category: Fedorov AA]]
-
[[Category: Fedorov, A A.]]
+
[[Category: Fedorov EV]]
-
[[Category: Fedorov, E V.]]
+
-
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
+
-
[[Category: new york structural genomix research consortium]]
+
-
[[Category: nysgxrc target t1779]]
+
-
[[Category: protein structure initiative]]
+
-
[[Category: psi]]
+
-
[[Category: structural genomic]]
+
-
[[Category: thiamine biosynthesis]]
+
-
[[Category: tim barrel]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 00:41:20 2008''
+

Current revision

Crystal structure of thiamine biosynthesis protein from Pseudomonas Aeruginosa

PDB ID 1wv2

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools