5ogx

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(New page: '''Unreleased structure''' The entry 5ogx is ON HOLD Authors: Mallinson, S.J.B., Johnson, C.W., Neidle, E.L., Beckham, G.T., McGeehan, J.E. Description: Crystal structure of Amycolatop...)
Current revision (11:22, 3 January 2024) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 5ogx is ON HOLD
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==Crystal structure of Amycolatopsis cytochrome P450 reductase GcoB.==
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<StructureSection load='5ogx' size='340' side='right'caption='[[5ogx]], [[Resolution|resolution]] 1.72&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[5ogx]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Amycolatopsis_methanolica_239 Amycolatopsis methanolica 239]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5OGX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5OGX FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.72&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BR:BROMIDE+ION'>BR</scene>, <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=FES:FE2/S2+(INORGANIC)+CLUSTER'>FES</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5ogx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ogx OCA], [https://pdbe.org/5ogx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5ogx RCSB], [https://www.ebi.ac.uk/pdbsum/5ogx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5ogx ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/A0A076MZ01_AMYME A0A076MZ01_AMYME]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Microbial aromatic catabolism offers a promising approach to convert lignin, a vast source of renewable carbon, into useful products. Aryl-O-demethylation is an essential biochemical reaction to ultimately catabolize coniferyl and sinapyl lignin-derived aromatic compounds, and is often a key bottleneck for both native and engineered bioconversion pathways. Here, we report the comprehensive characterization of a promiscuous P450 aryl-O-demethylase, consisting of a cytochrome P450 protein from the family CYP255A (GcoA) and a three-domain reductase (GcoB) that together represent a new two-component P450 class. Though originally described as converting guaiacol to catechol, we show that this system efficiently demethylates both guaiacol and an unexpectedly wide variety of lignin-relevant monomers. Structural, biochemical, and computational studies of this novel two-component system elucidate the mechanism of its broad substrate specificity, presenting it as a new tool for a critical step in biological lignin conversion.
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Authors: Mallinson, S.J.B., Johnson, C.W., Neidle, E.L., Beckham, G.T., McGeehan, J.E.
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A promiscuous cytochrome P450 aromatic O-demethylase for lignin bioconversion.,Mallinson SJB, Machovina MM, Silveira RL, Garcia-Borras M, Gallup N, Johnson CW, Allen MD, Skaf MS, Crowley MF, Neidle EL, Houk KN, Beckham GT, DuBois JL, McGeehan JE Nat Commun. 2018 Jun 27;9(1):2487. doi: 10.1038/s41467-018-04878-2. PMID:29950589<ref>PMID:29950589</ref>
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Description: Crystal structure of Amycolatopsis cytochrome P450 reductase GcoB.
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Mallinson, S.J.B]]
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<div class="pdbe-citations 5ogx" style="background-color:#fffaf0;"></div>
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[[Category: Neidle, E.L]]
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== References ==
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[[Category: Mcgeehan, J.E]]
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<references/>
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[[Category: Johnson, C.W]]
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__TOC__
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[[Category: Beckham, G.T]]
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</StructureSection>
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[[Category: Amycolatopsis methanolica 239]]
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[[Category: Large Structures]]
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[[Category: Beckham GT]]
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[[Category: Johnson CW]]
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[[Category: Mallinson SJB]]
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[[Category: McGeehan JE]]
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[[Category: Neidle EL]]

Current revision

Crystal structure of Amycolatopsis cytochrome P450 reductase GcoB.

PDB ID 5ogx

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