5w89

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(New page: '''Unreleased structure''' The entry 5w89 is ON HOLD until Paper Publication Authors: Rezaei Araghi, R., Jenson, J.M., Grant, R.A., Keating, A.E. Description: Crystal structure of huma...)
Current revision (10:05, 15 November 2023) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 5w89 is ON HOLD until Paper Publication
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==Crystal structure of human Mcl-1 in complex with modified Bim BH3 peptide SAH-MS1-18==
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<StructureSection load='5w89' size='340' side='right'caption='[[5w89]], [[Resolution|resolution]] 1.42&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[5w89]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5W89 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5W89 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.42&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=MK8:2-METHYL-L-NORLEUCINE'>MK8</scene>, <scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene>, <scene name='pdbligand=NLE:NORLEUCINE'>NLE</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5w89 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5w89 OCA], [https://pdbe.org/5w89 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5w89 RCSB], [https://www.ebi.ac.uk/pdbsum/5w89 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5w89 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/MCL1_HUMAN MCL1_HUMAN] Involved in the regulation of apoptosis versus cell survival, and in the maintenance of viability but not of proliferation. Mediates its effects by interactions with a number of other regulators of apoptosis. Isoform 1 inhibits apoptosis. Isoform 2 promotes apoptosis.<ref>PMID:10766760</ref>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Bcl-2 family proteins regulate apoptosis, and aberrant interactions of overexpressed antiapoptotic family members such as Mcl-1 promote cell transformation, cancer survival, and resistance to chemotherapy. Discovering potent and selective Mcl-1 inhibitors that can relieve apoptotic blockades is thus a high priority for cancer research. An attractive strategy for disabling Mcl-1 involves using designer peptides to competitively engage its binding groove, mimicking the structural mechanism of action of native sensitizer BH3-only proteins. We transformed Mcl-1-binding peptides into alpha-helical, cell-penetrating constructs that are selectively cytotoxic to Mcl-1-dependent cancer cells. Critical to the design of effective inhibitors was our introduction of an all-hydrocarbon cross-link or "staple" that stabilizes alpha-helical structure, increases target binding affinity, and independently confers binding specificity for Mcl-1 over related Bcl-2 family paralogs. Two crystal structures of complexes at 1.4 A and 1.9 A resolution demonstrate how the hydrophobic staple induces an unanticipated structural rearrangement in Mcl-1 upon binding. Systematic sampling of staple location and iterative optimization of peptide sequence in accordance with established design principles provided peptides that target intracellular Mcl-1. This work provides proof of concept for the development of potent, selective, and cell-permeable stapled peptides for therapeutic targeting of Mcl-1 in cancer, applying a design and validation workflow applicable to a host of challenging biomedical targets.
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Authors: Rezaei Araghi, R., Jenson, J.M., Grant, R.A., Keating, A.E.
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Iterative optimization yields Mcl-1-targeting stapled peptides with selective cytotoxicity to Mcl-1-dependent cancer cells.,Rezaei Araghi R, Bird GH, Ryan JA, Jenson JM, Godes M, Pritz JR, Grant RA, Letai A, Walensky LD, Keating AE Proc Natl Acad Sci U S A. 2018 Jan 16. pii: 1712952115. doi:, 10.1073/pnas.1712952115. PMID:29339518<ref>PMID:29339518</ref>
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Description: Crystal structure of human Mcl-1 in complex with modified Bim BH3 peptide SAH-MS1-18
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Jenson, J.M]]
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<div class="pdbe-citations 5w89" style="background-color:#fffaf0;"></div>
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[[Category: Grant, R.A]]
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[[Category: Rezaei Araghi, R]]
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==See Also==
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[[Category: Keating, A.E]]
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*[[B-cell lymphoma proteins 3D structures|B-cell lymphoma proteins 3D structures]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Homo sapiens]]
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[[Category: Large Structures]]
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[[Category: Grant RA]]
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[[Category: Jenson JM]]
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[[Category: Keating AE]]
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[[Category: Rezaei Araghi R]]

Current revision

Crystal structure of human Mcl-1 in complex with modified Bim BH3 peptide SAH-MS1-18

PDB ID 5w89

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