5xdj

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'''Unreleased structure'''
 
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The entry 5xdj is ON HOLD
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==Esculentin-1a(1-21)NH2==
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<StructureSection load='5xdj' size='340' side='right'caption='[[5xdj]]' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[5xdj]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pelophylax_lessonae Pelophylax lessonae]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5XDJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5XDJ FirstGlance]. <br>
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5xdj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5xdj OCA], [https://pdbe.org/5xdj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5xdj RCSB], [https://www.ebi.ac.uk/pdbsum/5xdj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5xdj ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/ES1A_PELLE ES1A_PELLE]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Antimicrobial peptides (AMPs) represent new alternatives to cope with the increasing number of multi-drug resistant microbial infections. Recently, a derivative of the frog-skin AMP esculentin-1a, Esc(1-21), was found to rapidly kill both the planktonic and biofilm forms of the Gram-negative bacterium Pseudomonas aeruginosa with a membrane-perturbing activity as a plausible mode of action. Lately, its diastereomer Esc(1-21)-1c containing two d-amino acids i.e. DLeu14 and DSer17 revealed to be less cytotoxic, more stable to proteolytic degradation and more efficient in eradicating Pseudomonas biofilm. When tested in vitro against the free-living form of this pathogen, it displayed potent bactericidal activity, but this was weaker than that of the all-l peptide. To investigate the reason accounting for this difference, mechanistic studies were performed on Pseudomonas spheroplasts and anionic or zwitterionic membranes, mimicking the composition of microbial and mammalian membranes, respectively. Furthermore, structural studies by means of optical and nuclear magnetic resonance spectroscopies were carried out. Our results suggest that the different extent in the bactericidal activity between the two isomers is principally due to differences in their interaction with the bacterial cell wall components. Indeed, the lower ability in binding and perturbing anionic phospholipid bilayers for Esc(1-21)-1c contributes only in a small part to this difference, while the final effect of membrane thinning once the peptide is inserted into the membrane is identical to that provoked by Esc(1-21). In addition, the presence of two d-amino acids is sufficient to reduce the alpha-helical content of the peptide, in parallel with its lower cytotoxicity.
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Authors: Ghosh, A., Bhunia, A.
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Membrane perturbing activities and structural properties of the frog-skin derived peptide Esculentin-1a(1-21)NH2 and its Diastereomer Esc(1-21)-1c: Correlation with their antipseudomonal and cytotoxic activity.,Loffredo MR, Ghosh A, Harmouche N, Casciaro B, Luca V, Bortolotti A, Cappiello F, Stella L, Bhunia A, Bechinger B, Mangoni ML Biochim Biophys Acta. 2017 Sep 12;1859(12):2327-2339. doi:, 10.1016/j.bbamem.2017.09.009. PMID:28912103<ref>PMID:28912103</ref>
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Description: Esculentin-1a(1-21)NH2
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Bhunia, A]]
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<div class="pdbe-citations 5xdj" style="background-color:#fffaf0;"></div>
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[[Category: Ghosh, A]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Pelophylax lessonae]]
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[[Category: Bhunia A]]
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[[Category: Ghosh A]]

Current revision

Esculentin-1a(1-21)NH2

PDB ID 5xdj

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