This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1xpn

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:13, 6 March 2024) (edit) (undo)
 
(12 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1xpn.gif|left|200px]]
 
-
{{Structure
+
==NMR structure of P. aeruginosa protein PA1324: Northeast Structural Genomics Consortium target PaP1==
-
|PDB= 1xpn |SIZE=350|CAPTION= <scene name='initialview01'>1xpn</scene>
+
<StructureSection load='1xpn' size='340' side='right'caption='[[1xpn]]' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND=
+
<table><tr><td colspan='2'>[[1xpn]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_PAO1 Pseudomonas aeruginosa PAO1]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XPN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1XPN FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
|GENE= PA1324 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=208964 Pseudomonas aeruginosa PAO1])
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1xpn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xpn OCA], [https://pdbe.org/1xpn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1xpn RCSB], [https://www.ebi.ac.uk/pdbsum/1xpn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1xpn ProSAT], [https://www.topsan.org/Proteins/NESGC/1xpn TOPSAN]</span></td></tr>
-
|DOMAIN=
+
</table>
-
|RELATEDENTRY=
+
== Function ==
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1xpn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xpn OCA], [http://www.ebi.ac.uk/pdbsum/1xpn PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1xpn RCSB]</span>
+
[https://www.uniprot.org/uniprot/Q9I420_PSEAE Q9I420_PSEAE]
-
}}
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
'''NMR structure of P. aeruginosa protein PA1324: Northeast Structural Genomics Consortium target PaP1'''
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
 
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xp/1xpn_consurf.spt"</scriptWhenChecked>
-
==About this Structure==
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
1XPN is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_pao1 Pseudomonas aeruginosa pao1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XPN OCA].
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Pseudomonas aeruginosa pao1]]
+
</jmolCheckbox>
-
[[Category: Single protein]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1xpn ConSurf].
-
[[Category: Cort, J R.]]
+
<div style="clear:both"></div>
-
[[Category: Kennedy, M A.]]
+
__TOC__
-
[[Category: Lockert, E E.]]
+
</StructureSection>
-
[[Category: Montelione, G T.]]
+
[[Category: Large Structures]]
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Pseudomonas aeruginosa PAO1]]
-
[[Category: Ni, S.]]
+
[[Category: Cort JR]]
-
[[Category: b-barrel]]
+
[[Category: Kennedy MA]]
-
[[Category: nesg]]
+
[[Category: Lockert EE]]
-
[[Category: northeast structural genomics consortium]]
+
[[Category: Montelione GT]]
-
[[Category: protein structure initiative]]
+
[[Category: Ni S]]
-
[[Category: psi]]
+
-
[[Category: structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 00:52:52 2008''
+

Current revision

NMR structure of P. aeruginosa protein PA1324: Northeast Structural Genomics Consortium target PaP1

PDB ID 1xpn

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools