This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5y89

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: '''Unreleased structure''' The entry 5y89 is ON HOLD until Paper Publication Authors: Naoe, Y., Nakamura, N., Rahman, M.M., Shiro, Y., Sugimoto, H. Description: Periplasmic heme-bindin...)
Current revision (10:22, 27 March 2024) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 5y89 is ON HOLD until Paper Publication
+
==Periplasmic heme-binding protein BhuT in complex with one heme (holo-1)==
-
 
+
<StructureSection load='5y89' size='340' side='right'caption='[[5y89]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
-
Authors: Naoe, Y., Nakamura, N., Rahman, M.M., Shiro, Y., Sugimoto, H.
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[5y89]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Burkholderia_cenocepacia_J2315 Burkholderia cenocepacia J2315]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=5gj0 5gj0]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5Y89 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5Y89 FirstGlance]. <br>
-
Description: Periplasmic heme-binding protein BhuT in complex with one heme (holo-1)
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-
[[Category: Unreleased Structures]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
[[Category: Shiro, Y]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5y89 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5y89 OCA], [https://pdbe.org/5y89 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5y89 RCSB], [https://www.ebi.ac.uk/pdbsum/5y89 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5y89 ProSAT]</span></td></tr>
-
[[Category: Sugimoto, H]]
+
</table>
-
[[Category: Rahman, M.M]]
+
== Function ==
-
[[Category: Nakamura, N]]
+
[https://www.uniprot.org/uniprot/B4EKB3_BURCJ B4EKB3_BURCJ]
-
[[Category: Naoe, Y]]
+
__TOC__
 +
</StructureSection>
 +
[[Category: Burkholderia cenocepacia J2315]]
 +
[[Category: Large Structures]]
 +
[[Category: Nakamura N]]
 +
[[Category: Naoe Y]]
 +
[[Category: Rahman MM]]
 +
[[Category: Shiro Y]]
 +
[[Category: Sugimoto H]]

Current revision

Periplasmic heme-binding protein BhuT in complex with one heme (holo-1)

PDB ID 5y89

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools