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1y9z

From Proteopedia

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[[Image:1y9z.gif|left|200px]]
 
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{{Structure
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==Crystal Structure of Psychrophilic Subtilisin-like Serine Protease from Antarctic Psychrotroph Pseudoalteromonas sp. AS-11 at 0.14 nm resolution==
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|PDB= 1y9z |SIZE=350|CAPTION= <scene name='initialview01'>1y9z</scene>, resolution 1.40&Aring;
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<StructureSection load='1y9z' size='340' side='right'caption='[[1y9z]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
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|SITE=
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== Structural highlights ==
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|LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PMS:BENZYLSULFINIC+ACID'>PMS</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene>
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<table><tr><td colspan='2'>[[1y9z]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudoalteromonas_sp._AS-11 Pseudoalteromonas sp. AS-11]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Y9Z OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Y9Z FirstGlance]. <br>
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|ACTIVITY=
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.4&#8491;</td></tr>
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|GENE=
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PMS:PHENYLMETHANESULFONIC+ACID'>PMS</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
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|DOMAIN=
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1y9z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1y9z OCA], [https://pdbe.org/1y9z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1y9z RCSB], [https://www.ebi.ac.uk/pdbsum/1y9z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1y9z ProSAT]</span></td></tr>
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|RELATEDENTRY=[[1wvm|1WVM]], [[1v6c|1V6C]]
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</table>
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1y9z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1y9z OCA], [http://www.ebi.ac.uk/pdbsum/1y9z PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1y9z RCSB]</span>
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== Function ==
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}}
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[https://www.uniprot.org/uniprot/Q65Z69_9GAMM Q65Z69_9GAMM]
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== Evolutionary Conservation ==
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'''Crystal Structure of Psychrophilic Subtilisin-like Serine Protease from Antarctic Psychrotroph Pseudoalteromonas sp. AS-11 at 0.14 nm resolution'''
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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==About this Structure==
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/y9/1y9z_consurf.spt"</scriptWhenChecked>
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1Y9Z is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacteria Bacteria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Y9Z OCA].
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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[[Category: Bacteria]]
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: Single protein]]
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</jmolCheckbox>
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[[Category: Dong, D.]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1y9z ConSurf].
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[[Category: Watanabe, K.]]
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<div style="clear:both"></div>
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[[Category: insert beta barrel domain]]
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__TOC__
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[[Category: subtilisin-like alpha/beta domain]]
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</StructureSection>
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[[Category: Large Structures]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 01:00:41 2008''
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[[Category: Pseudoalteromonas sp. AS-11]]
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[[Category: Dong D]]
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[[Category: Watanabe K]]

Current revision

Crystal Structure of Psychrophilic Subtilisin-like Serine Protease from Antarctic Psychrotroph Pseudoalteromonas sp. AS-11 at 0.14 nm resolution

PDB ID 1y9z

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