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1yd7

From Proteopedia

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[[Image:1yd7.gif|left|200px]]
 
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{{Structure
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==Conserved hypothetical protein Pfu-1647980-001 from Pyrococcus furiosus==
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|PDB= 1yd7 |SIZE=350|CAPTION= <scene name='initialview01'>1yd7</scene>, resolution 2.30&Aring;
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<StructureSection load='1yd7' size='340' side='right'caption='[[1yd7]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
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|SITE=
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== Structural highlights ==
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|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=UNX:UNKNOWN+ATOM+OR+ION'>UNX</scene>
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<table><tr><td colspan='2'>[[1yd7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YD7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YD7 FirstGlance]. <br>
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|ACTIVITY=
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
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|GENE=
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=UNX:UNKNOWN+ATOM+OR+ION'>UNX</scene></td></tr>
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|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PRK08659 PRK08659], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam02780 Transketolase_C], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam01855 POR_N]</span>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yd7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yd7 OCA], [https://pdbe.org/1yd7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yd7 RCSB], [https://www.ebi.ac.uk/pdbsum/1yd7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yd7 ProSAT], [https://www.topsan.org/Proteins/SECSG/1yd7 TOPSAN]</span></td></tr>
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|RELATEDENTRY=
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</table>
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1yd7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yd7 OCA], [http://www.ebi.ac.uk/pdbsum/1yd7 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1yd7 RCSB]</span>
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== Function ==
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}}
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[https://www.uniprot.org/uniprot/Q8U046_PYRFU Q8U046_PYRFU]
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== Evolutionary Conservation ==
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'''Conserved hypothetical protein Pfu-1647980-001 from Pyrococcus furiosus'''
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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==About this Structure==
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yd/1yd7_consurf.spt"</scriptWhenChecked>
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1YD7 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YD7 OCA].
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1yd7 ConSurf].
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<div style="clear:both"></div>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
[[Category: Pyrococcus furiosus]]
[[Category: Pyrococcus furiosus]]
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[[Category: Single protein]]
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[[Category: Adams MWW]]
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[[Category: Adams, M W.W.]]
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[[Category: Chang J]]
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[[Category: Chang, J.]]
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[[Category: Chang S-H]]
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[[Category: Chang, S H.]]
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[[Category: Chen L]]
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[[Category: Chen, L.]]
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[[Category: Florence Q]]
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[[Category: Florence, Q.]]
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[[Category: Habel J]]
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[[Category: Habel, J.]]
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[[Category: Horanyi P]]
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[[Category: Horanyi, P.]]
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[[Category: Jenney Jr FE]]
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[[Category: Jr., F E.Jenney.]]
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[[Category: Lee D]]
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[[Category: Lee, D.]]
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[[Category: Lin D]]
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[[Category: Lin, D.]]
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[[Category: Liu Z-J]]
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[[Category: Liu, Z J.]]
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[[Category: Nguyen D]]
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[[Category: Nguyen, D.]]
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[[Category: Praissman J]]
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[[Category: Praissman, J.]]
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[[Category: Rose JP]]
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[[Category: Rose, J P.]]
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[[Category: Tempel W]]
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[[Category: SECSG, Southeast Collaboratory for Structural Genomics.]]
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[[Category: Wang B-C]]
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[[Category: Tempel, W.]]
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[[Category: Xu H]]
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[[Category: Wang, B C.]]
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[[Category: Zhang H]]
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[[Category: Xu, H.]]
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[[Category: Zhao M]]
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[[Category: Zhang, H.]]
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[[Category: Zhou W]]
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[[Category: Zhao, M.]]
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[[Category: Zhou, W.]]
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[[Category: conserved hypothetical protein]]
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[[Category: hyperthermophile]]
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[[Category: protein structure initiative]]
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[[Category: psi]]
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[[Category: pyrococcus furiosus]]
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[[Category: secsg]]
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[[Category: southeast collaboratory for structural genomic]]
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[[Category: structural genomic]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 01:03:23 2008''
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Current revision

Conserved hypothetical protein Pfu-1647980-001 from Pyrococcus furiosus

PDB ID 1yd7

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