1yey

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (05:01, 17 October 2024) (edit) (undo)
 
(13 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1yey.gif|left|200px]]
 
-
{{Structure
+
==Crystal Structure of L-fuconate Dehydratase from Xanthomonas campestris pv. campestris str. ATCC 33913==
-
|PDB= 1yey |SIZE=350|CAPTION= <scene name='initialview01'>1yey</scene>, resolution 2.34&Aring;
+
<StructureSection load='1yey' size='340' side='right'caption='[[1yey]], [[Resolution|resolution]] 2.34&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
+
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YEY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YEY FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.34&#8491;</td></tr>
-
|GENE=
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd03324 rTSbeta_L-fuconate_dehydratase], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG4948 COG4948]</span>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yey FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yey OCA], [https://pdbe.org/1yey PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yey RCSB], [https://www.ebi.ac.uk/pdbsum/1yey PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yey ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/1yey TOPSAN]</span></td></tr>
-
|RELATEDENTRY=
+
</table>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1yey FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yey OCA], [http://www.ebi.ac.uk/pdbsum/1yey PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1yey RCSB]</span>
+
== Evolutionary Conservation ==
-
}}
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
'''Crystal Structure of L-fuconate Dehydratase from Xanthomonas campestris pv. campestris str. ATCC 33913'''
+
<jmolCheckbox>
-
 
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ye/1yey_consurf.spt"</scriptWhenChecked>
-
 
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
==About this Structure==
+
<text>to colour the structure by Evolutionary Conservation</text>
-
1YEY is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Xanthomonas_campestris_pv._campestris Xanthomonas campestris pv. campestris]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YEY OCA].
+
</jmolCheckbox>
-
[[Category: Single protein]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1yey ConSurf].
-
[[Category: Xanthomonas campestris pv. campestris]]
+
<div style="clear:both"></div>
-
[[Category: Almo, S C.]]
+
__TOC__
-
[[Category: Burley, S K.]]
+
</StructureSection>
-
[[Category: Fedorov, A A.]]
+
[[Category: Large Structures]]
-
[[Category: Fedorov, E V.]]
+
[[Category: Almo SC]]
-
[[Category: Gerlt, J A.]]
+
[[Category: Burley SK]]
-
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
+
[[Category: Fedorov AA]]
-
[[Category: Yew, W S.]]
+
[[Category: Fedorov EV]]
-
[[Category: enolase superfamily]]
+
[[Category: Gerlt JA]]
-
[[Category: l-fuconate dehydratase]]
+
[[Category: Yew WS]]
-
[[Category: new york structural genomix research consortium]]
+
-
[[Category: nysgxrc target t2188]]
+
-
[[Category: protein structure initiative]]
+
-
[[Category: psi]]
+
-
[[Category: structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 01:05:16 2008''
+

Current revision

Crystal Structure of L-fuconate Dehydratase from Xanthomonas campestris pv. campestris str. ATCC 33913

PDB ID 1yey

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools