1yhf

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (00:41, 21 November 2024) (edit) (undo)
 
(12 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1yhf.gif|left|200px]]
 
-
{{Structure
+
==Crystal Structure of Conserved SPY1581 Protein of Unknown Function from Streptococcus pyogenes==
-
|PDB= 1yhf |SIZE=350|CAPTION= <scene name='initialview01'>1yhf</scene>, resolution 2.00&Aring;
+
<StructureSection load='1yhf' size='340' side='right'caption='[[1yhf]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
+
<table><tr><td colspan='2'>[[1yhf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pyogenes_M1_GAS Streptococcus pyogenes M1 GAS]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YHF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YHF FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
|GENE= SPy1581 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1314 Streptococcus pyogenes])
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1917 COG1917]</span>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yhf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yhf OCA], [https://pdbe.org/1yhf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yhf RCSB], [https://www.ebi.ac.uk/pdbsum/1yhf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yhf ProSAT], [https://www.topsan.org/Proteins/MCSG/1yhf TOPSAN]</span></td></tr>
-
|RELATEDENTRY=
+
</table>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1yhf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yhf OCA], [http://www.ebi.ac.uk/pdbsum/1yhf PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1yhf RCSB]</span>
+
== Evolutionary Conservation ==
-
}}
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
'''Crystal Structure of Conserved SPY1581 Protein of Unknown Function from Streptococcus pyogenes'''
+
<jmolCheckbox>
-
 
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yh/1yhf_consurf.spt"</scriptWhenChecked>
-
 
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
==About this Structure==
+
<text>to colour the structure by Evolutionary Conservation</text>
-
1YHF is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Streptococcus_pyogenes Streptococcus pyogenes]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YHF OCA].
+
</jmolCheckbox>
-
[[Category: Single protein]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1yhf ConSurf].
-
[[Category: Streptococcus pyogenes]]
+
<div style="clear:both"></div>
-
[[Category: Collart, F.]]
+
__TOC__
-
[[Category: Joachimiak, A.]]
+
</StructureSection>
-
[[Category: Lezondra, L.]]
+
[[Category: Large Structures]]
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
[[Category: Streptococcus pyogenes M1 GAS]]
-
[[Category: Moy, S.]]
+
[[Category: Collart F]]
-
[[Category: Osipiuk, J.]]
+
[[Category: Joachimiak A]]
-
[[Category: conserved hypothetical protein]]
+
[[Category: Lezondra L]]
-
[[Category: mcsg]]
+
[[Category: Moy S]]
-
[[Category: midwest center for structural genomic]]
+
[[Category: Osipiuk J]]
-
[[Category: protein structure initiative]]
+
-
[[Category: psi]]
+
-
[[Category: structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 01:07:23 2008''
+

Current revision

Crystal Structure of Conserved SPY1581 Protein of Unknown Function from Streptococcus pyogenes

PDB ID 1yhf

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools