2e80

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:52, 23 October 2024) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
==Cytochrome c Nitrite Reductase from Wolinella succinogenes with bound substrate nitrite==
==Cytochrome c Nitrite Reductase from Wolinella succinogenes with bound substrate nitrite==
-
<StructureSection load='2e80' size='340' side='right' caption='[[2e80]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
+
<StructureSection load='2e80' size='340' side='right'caption='[[2e80]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2e80]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Vibrio_succinogenes Vibrio succinogenes]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2E80 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2E80 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2e80]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Wolinella_succinogenes_DSM_1740 Wolinella succinogenes DSM 1740]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2E80 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2E80 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=NO2:NITRITE+ION'>NO2</scene>, <scene name='pdbligand=YT3:YTTRIUM+(III)+ION'>YT3</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1fs7|1fs7]], [[1fs8|1fs8]], [[1fs9|1fs9]], [[2e81|2e81]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=NO2:NITRITE+ION'>NO2</scene>, <scene name='pdbligand=YT3:YTTRIUM+(III)+ION'>YT3</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Nitrite_reductase_(cytochrome;_ammonia-forming) Nitrite reductase (cytochrome; ammonia-forming)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.7.2.2 1.7.2.2] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2e80 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2e80 OCA], [https://pdbe.org/2e80 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2e80 RCSB], [https://www.ebi.ac.uk/pdbsum/2e80 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2e80 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2e80 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2e80 OCA], [http://pdbe.org/2e80 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2e80 RCSB], [http://www.ebi.ac.uk/pdbsum/2e80 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2e80 ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/NRFA_WOLSU NRFA_WOLSU]] Plays a role in nitrite reduction.<ref>PMID:10672190</ref>
+
[https://www.uniprot.org/uniprot/NRFA_WOLSU NRFA_WOLSU] Plays a role in nitrite reduction.<ref>PMID:10672190</ref>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e8/2e80_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e8/2e80_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
Line 30: Line 29:
</div>
</div>
<div class="pdbe-citations 2e80" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 2e80" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Cytochrome c nitrite reductase|Cytochrome c nitrite reductase]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Vibrio succinogenes]]
+
[[Category: Large Structures]]
-
[[Category: Einsle, O]]
+
[[Category: Wolinella succinogenes DSM 1740]]
-
[[Category: Kroneck, P M.H]]
+
[[Category: Einsle O]]
-
[[Category: Multiheme cytochrome]]
+
[[Category: Kroneck PMH]]
-
[[Category: Nitrite reductase]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Substrate complex]]
+

Current revision

Cytochrome c Nitrite Reductase from Wolinella succinogenes with bound substrate nitrite

PDB ID 2e80

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools