1yr9

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==PAB0955 crystal structure : a GTPase in GDP and PO4 bound form from Pyrococcus abyssi==
==PAB0955 crystal structure : a GTPase in GDP and PO4 bound form from Pyrococcus abyssi==
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<StructureSection load='1yr9' size='340' side='right' caption='[[1yr9]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
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<StructureSection load='1yr9' size='340' side='right'caption='[[1yr9]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[1yr9]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"pyrococcus_abyssi"_erauso_et_al._1993 "pyrococcus abyssi" erauso et al. 1993]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YR9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1YR9 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[1yr9]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_abyssi Pyrococcus abyssi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YR9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YR9 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1yr6|1yr6]], [[1yr7|1yr7]], [[1yr8|1yr8]], [[1yra|1yra]], [[1yrb|1yrb]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PAB0955 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=29292 "Pyrococcus abyssi" Erauso et al. 1993])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yr9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yr9 OCA], [https://pdbe.org/1yr9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yr9 RCSB], [https://www.ebi.ac.uk/pdbsum/1yr9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yr9 ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1yr9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yr9 OCA], [http://pdbe.org/1yr9 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1yr9 RCSB], [http://www.ebi.ac.uk/pdbsum/1yr9 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1yr9 ProSAT]</span></td></tr>
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</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/GPN_PYRAB GPN_PYRAB] Small GTPase that may be involved in genome maintenance. Has weak intrinsic GTPase activity but displays no ATPase activity.<ref>PMID:17468740</ref>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
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<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yr/1yr9_consurf.spt"</scriptWhenChecked>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yr/1yr9_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
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</div>
</div>
<div class="pdbe-citations 1yr9" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 1yr9" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[GTP-binding protein 3D structures|GTP-binding protein 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Pyrococcus abyssi erauso et al. 1993]]
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[[Category: Large Structures]]
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[[Category: Armengaud, J]]
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[[Category: Pyrococcus abyssi]]
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[[Category: Carpentier, P]]
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[[Category: Armengaud J]]
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[[Category: Gras, S]]
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[[Category: Carpentier P]]
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[[Category: Housset, D]]
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[[Category: Gras S]]
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[[Category: Gdp]]
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[[Category: Housset D]]
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[[Category: Gtp binding protein]]
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[[Category: Gtpase]]
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[[Category: Hydrolase]]
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[[Category: P-loop]]
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[[Category: Rossmann fold]]
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Current revision

PAB0955 crystal structure : a GTPase in GDP and PO4 bound form from Pyrococcus abyssi

PDB ID 1yr9

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