3acg

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:18, 1 November 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Crystal Structure of Carbohydrate-Binding Module Family 28 from Clostridium josui Cel5A in complex with cellobiose==
==Crystal Structure of Carbohydrate-Binding Module Family 28 from Clostridium josui Cel5A in complex with cellobiose==
-
<StructureSection load='3acg' size='340' side='right' caption='[[3acg]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
+
<StructureSection load='3acg' size='340' side='right'caption='[[3acg]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3acg]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Clojo Clojo]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ACG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ACG FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3acg]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Ruminiclostridium_josui Ruminiclostridium josui]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ACG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3ACG FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3acf|3acf]], [[3ach|3ach]], [[3aci|3aci]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=PRD_900005:beta-cellobiose'>PRD_900005</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">celA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1499 CLOJO])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3acg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3acg OCA], [https://pdbe.org/3acg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3acg RCSB], [https://www.ebi.ac.uk/pdbsum/3acg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3acg ProSAT]</span></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Cellulase Cellulase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.4 3.2.1.4] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3acg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3acg OCA], [http://pdbe.org/3acg PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3acg RCSB], [http://www.ebi.ac.uk/pdbsum/3acg PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3acg ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q59290_RUMJO Q59290_RUMJO]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ac/3acg_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ac/3acg_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
Line 29: Line 29:
</div>
</div>
<div class="pdbe-citations 3acg" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 3acg" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Glucanase 3D structures|Glucanase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Cellulase]]
+
[[Category: Large Structures]]
-
[[Category: Clojo]]
+
[[Category: Ruminiclostridium josui]]
-
[[Category: Araki, Y]]
+
[[Category: Araki Y]]
-
[[Category: Fushinobu, S]]
+
[[Category: Fushinobu S]]
-
[[Category: Karita, S]]
+
[[Category: Karita S]]
-
[[Category: Shoun, H]]
+
[[Category: Shoun H]]
-
[[Category: Suzuki, K]]
+
[[Category: Suzuki K]]
-
[[Category: Takada, R]]
+
[[Category: Takada R]]
-
[[Category: Tsukimoto, K]]
+
[[Category: Tsukimoto K]]
-
[[Category: Wakagi, T]]
+
[[Category: Wakagi T]]
-
[[Category: Watanabe, T]]
+
[[Category: Watanabe T]]
-
[[Category: Beta-jellyroll]]
+
-
[[Category: Cellulose-binding domain]]
+
-
[[Category: Hydrolase]]
+

Current revision

Crystal Structure of Carbohydrate-Binding Module Family 28 from Clostridium josui Cel5A in complex with cellobiose

PDB ID 3acg

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3acg"
Personal tools