1nqk

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:58, 14 February 2024) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Structural Genomics, Crystal structure of Alkanesulfonate monooxygenase==
==Structural Genomics, Crystal structure of Alkanesulfonate monooxygenase==
-
<StructureSection load='1nqk' size='340' side='right' caption='[[1nqk]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
+
<StructureSection load='1nqk' size='340' side='right'caption='[[1nqk]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1nqk]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NQK OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1NQK FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1nqk]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NQK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1NQK FirstGlance]. <br>
-
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ycbN ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 "Bacillus coli" Migula 1895])</td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1nqk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1nqk OCA], [http://pdbe.org/1nqk PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1nqk RCSB], [http://www.ebi.ac.uk/pdbsum/1nqk PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1nqk ProSAT], [http://www.topsan.org/Proteins/MCSG/1nqk TOPSAN]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1nqk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1nqk OCA], [https://pdbe.org/1nqk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1nqk RCSB], [https://www.ebi.ac.uk/pdbsum/1nqk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1nqk ProSAT], [https://www.topsan.org/Proteins/MCSG/1nqk TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/SSUD_ECOLI SSUD_ECOLI]] Involved in desulfonation of aliphatic sulfonates. Catalyzes the conversion of pentanesulfonic acid to sulfite and pentaldehyde and is able to desulfonate a wide range of sulfonated substrates including C-2 to C-10 unsubstituted linear alkanesulfonates, substituted ethanesulfonic acids and sulfonated buffers.[HAMAP-Rule:MF_01229]
+
[https://www.uniprot.org/uniprot/SSUD_ECOLI SSUD_ECOLI] Involved in desulfonation of aliphatic sulfonates. Catalyzes the conversion of pentanesulfonic acid to sulfite and pentaldehyde and is able to desulfonate a wide range of sulfonated substrates including C-2 to C-10 unsubstituted linear alkanesulfonates, substituted ethanesulfonic acids and sulfonated buffers.[HAMAP-Rule:MF_01229]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nq/1nqk_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nq/1nqk_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
Line 21: Line 21:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Bacillus coli migula 1895]]
+
[[Category: Escherichia coli]]
-
[[Category: Edwards, A]]
+
[[Category: Large Structures]]
-
[[Category: Joachimiak, A]]
+
[[Category: Edwards A]]
-
[[Category: Structural genomic]]
+
[[Category: Joachimiak A]]
-
[[Category: Savchenko, A]]
+
[[Category: Savchenko A]]
-
[[Category: Skarina, T]]
+
[[Category: Skarina T]]
-
[[Category: Zhang, R]]
+
[[Category: Zhang R]]
-
[[Category: Beta barrel]]
+
-
[[Category: Mcsg]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: PSI, Protein structure initiative]]
+

Current revision

Structural Genomics, Crystal structure of Alkanesulfonate monooxygenase

PDB ID 1nqk

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools