1yqc

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[[Image:1yqc.gif|left|200px]]
 
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{{Structure
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==Crystal Structure of Ureidoglycolate Hydrolase (AllA) from Escherichia coli O157:H7==
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|PDB= 1yqc |SIZE=350|CAPTION= <scene name='initialview01'>1yqc</scene>, resolution 1.709&Aring;
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<StructureSection load='1yqc' size='340' side='right'caption='[[1yqc]], [[Resolution|resolution]] 1.71&Aring;' scene=''>
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|SITE=
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== Structural highlights ==
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|LIGAND= <scene name='pdbligand=GLV:GLYOXYLIC+ACID'>GLV</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
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<table><tr><td colspan='2'>[[1yqc]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_O157:H7 Escherichia coli O157:H7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YQC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YQC FirstGlance]. <br>
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|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Ureidoglycolate_hydrolase Ureidoglycolate hydrolase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.3.19 3.5.3.19] </span>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.709&#8491;</td></tr>
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|GENE= AllA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli])
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GLV:GLYOXYLIC+ACID'>GLV</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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|DOMAIN=
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yqc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yqc OCA], [https://pdbe.org/1yqc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yqc RCSB], [https://www.ebi.ac.uk/pdbsum/1yqc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yqc ProSAT], [https://www.topsan.org/Proteins/BSGI/1yqc TOPSAN]</span></td></tr>
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|RELATEDENTRY=
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</table>
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1yqc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yqc OCA], [http://www.ebi.ac.uk/pdbsum/1yqc PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1yqc RCSB]</span>
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== Function ==
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}}
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[https://www.uniprot.org/uniprot/ALLA_ECO57 ALLA_ECO57] Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the anaerobic utilization of allantoin as sole nitrogen source. Reinforces the induction of genes involved in the degradation of allantoin and glyoxylate by producing glyoxylate (By similarity).[HAMAP-Rule:MF_00616]
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== Evolutionary Conservation ==
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'''Crystal Structure of Ureidoglycolate Hydrolase (AllA) from Escherichia coli O157:H7'''
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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==About this Structure==
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yq/1yqc_consurf.spt"</scriptWhenChecked>
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1YQC is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YQC OCA].
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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==Reference==
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</jmolCheckbox>
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Crystal structure of ureidoglycolate hydrolase (AllA) from Escherichia coli O157:H7., Raymond S, Tocilj A, Ajamian E, Li Y, Hung MN, Matte A, Cygler M, Proteins. 2005 Nov 1;61(2):454-9. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16114032 16114032]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1yqc ConSurf].
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[[Category: Escherichia coli]]
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<div style="clear:both"></div>
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[[Category: Single protein]]
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__TOC__
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[[Category: Ureidoglycolate hydrolase]]
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</StructureSection>
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[[Category: BSGI, Montreal-Kingston Bacterial Structural Genomics Initiative.]]
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[[Category: Escherichia coli O157:H7]]
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[[Category: Cygler, M.]]
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[[Category: Large Structures]]
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[[Category: Matte, A.]]
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[[Category: Cygler M]]
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[[Category: Raymond, S.]]
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[[Category: Matte A]]
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[[Category: Tocilj, A.]]
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[[Category: Raymond S]]
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[[Category: alla]]
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[[Category: Tocilj A]]
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[[Category: bsgi]]
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[[Category: hydrolase]]
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[[Category: montreal-kingston bacterial structural genomics initiative]]
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[[Category: purine metabolism]]
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[[Category: structural genomic]]
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[[Category: ureidoglycolate]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 01:17:48 2008''
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Current revision

Crystal Structure of Ureidoglycolate Hydrolase (AllA) from Escherichia coli O157:H7

PDB ID 1yqc

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