2hei

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:56, 30 August 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Crystal structure of human RAB5B in complex with GDP==
==Crystal structure of human RAB5B in complex with GDP==
-
<StructureSection load='2hei' size='340' side='right' caption='[[2hei]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
+
<StructureSection load='2hei' size='340' side='right'caption='[[2hei]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2hei]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HEI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2HEI FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2hei]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HEI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2HEI FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=D1D:(4S,5S)-1,2-DITHIANE-4,5-DIOL'>D1D</scene>, <scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.55&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RAB5B ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=D1D:(4S,5S)-1,2-DITHIANE-4,5-DIOL'>D1D</scene>, <scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2hei FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2hei OCA], [http://pdbe.org/2hei PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2hei RCSB], [http://www.ebi.ac.uk/pdbsum/2hei PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2hei ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2hei FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2hei OCA], [https://pdbe.org/2hei PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2hei RCSB], [https://www.ebi.ac.uk/pdbsum/2hei PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2hei ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/RAB5B_HUMAN RAB5B_HUMAN]] Protein transport. Probably involved in vesicular traffic (By similarity).
+
[https://www.uniprot.org/uniprot/RAB5B_HUMAN RAB5B_HUMAN] Protein transport. Probably involved in vesicular traffic (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/he/2hei_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/he/2hei_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
Line 22: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Human]]
+
[[Category: Homo sapiens]]
-
[[Category: Arrowsmith, C H]]
+
[[Category: Large Structures]]
-
[[Category: Bochkarev, A]]
+
[[Category: Arrowsmith CH]]
-
[[Category: Edwards, A M]]
+
[[Category: Bochkarev A]]
-
[[Category: Hong, B]]
+
[[Category: Edwards AM]]
-
[[Category: Landry, R]]
+
[[Category: Hong B]]
-
[[Category: Park, H]]
+
[[Category: Landry R]]
-
[[Category: Structural genomic]]
+
[[Category: Park H]]
-
[[Category: Shen, L]]
+
[[Category: Shen L]]
-
[[Category: Sundstrom, M]]
+
[[Category: Sundstrom M]]
-
[[Category: Tempel, W]]
+
[[Category: Tempel W]]
-
[[Category: Wang, J]]
+
[[Category: Wang J]]
-
[[Category: Weigelt, J]]
+
[[Category: Weigelt J]]
-
[[Category: G-protein]]
+
-
[[Category: Rab]]
+
-
[[Category: Sgc]]
+
-
[[Category: Transport protein]]
+

Current revision

Crystal structure of human RAB5B in complex with GDP

PDB ID 2hei

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2hei"
Personal tools