2id1
From Proteopedia
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==X-Ray Crystal Structure of Protein CV0518 from Chromobacterium violaceum, Northeast Structural Genomics Consortium Target CvR5.== | ==X-Ray Crystal Structure of Protein CV0518 from Chromobacterium violaceum, Northeast Structural Genomics Consortium Target CvR5.== | ||
- | <StructureSection load='2id1' size='340' side='right' caption='[[2id1]], [[Resolution|resolution]] 3.00Å' scene=''> | + | <StructureSection load='2id1' size='340' side='right'caption='[[2id1]], [[Resolution|resolution]] 3.00Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[2id1]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2id1]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Chromobacterium_violaceum_ATCC_12472 Chromobacterium violaceum ATCC 12472]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ID1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ID1 FirstGlance]. <br> |
- | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3Å</td></tr> |
- | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
- | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2id1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2id1 OCA], [https://pdbe.org/2id1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2id1 RCSB], [https://www.ebi.ac.uk/pdbsum/2id1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2id1 ProSAT], [https://www.topsan.org/Proteins/NESGC/2id1 TOPSAN]</span></td></tr> | |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
== Function == | == Function == | ||
- | [ | + | [https://www.uniprot.org/uniprot/IOJAP_CHRVO IOJAP_CHRVO] Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.[HAMAP-Rule:MF_01477] |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
- | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/id/2id1_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/id/2id1_consurf.spt"</scriptWhenChecked> |
- | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/ | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> |
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
Line 23: | Line 22: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: | + | [[Category: Chromobacterium violaceum ATCC 12472]] |
- | [[Category: Acton | + | [[Category: Large Structures]] |
- | [[Category: Baran | + | [[Category: Acton TB]] |
- | [[Category: Cunningham | + | [[Category: Baran M]] |
- | [[Category: Forouhar | + | [[Category: Cunningham K]] |
- | [[Category: Ho | + | [[Category: Forouhar F]] |
- | [[Category: Hunt | + | [[Category: Ho CK]] |
- | [[Category: Janjua | + | [[Category: Hunt JF]] |
- | [[Category: Liu | + | [[Category: Janjua H]] |
- | [[Category: Ma | + | [[Category: Liu J]] |
- | [[Category: Montelione | + | [[Category: Ma LC]] |
- | + | [[Category: Montelione GT]] | |
- | [[Category: Rost | + | [[Category: Rost B]] |
- | [[Category: Seetharaman | + | [[Category: Seetharaman J]] |
- | [[Category: Tong | + | [[Category: Tong L]] |
- | [[Category: Xiao | + | [[Category: Xiao R]] |
- | [[Category: Zhou | + | [[Category: Zhou W]] |
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Current revision
X-Ray Crystal Structure of Protein CV0518 from Chromobacterium violaceum, Northeast Structural Genomics Consortium Target CvR5.
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Categories: Chromobacterium violaceum ATCC 12472 | Large Structures | Acton TB | Baran M | Cunningham K | Forouhar F | Ho CK | Hunt JF | Janjua H | Liu J | Ma LC | Montelione GT | Rost B | Seetharaman J | Tong L | Xiao R | Zhou W