2oqi
From Proteopedia
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==Human Dipeptidyl Peptidase IV (DPP4) with Piperidinone-constrained phenethylamine== | ==Human Dipeptidyl Peptidase IV (DPP4) with Piperidinone-constrained phenethylamine== | ||
- | <StructureSection load='2oqi' size='340' side='right' caption='[[2oqi]], [[Resolution|resolution]] 2.80Å' scene=''> | + | <StructureSection load='2oqi' size='340' side='right'caption='[[2oqi]], [[Resolution|resolution]] 2.80Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[2oqi]] is a 4 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2oqi]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OQI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OQI FirstGlance]. <br> |
- | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8Å</td></tr> |
- | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GGO:(4R,5R)-5-AMINO-1-[2-(1,3-BENZODIOXOL-5-YL)ETHYL]-4-(2,4,5-TRIFLUOROPHENYL)PIPERIDIN-2-ONE'>GGO</scene></td></tr> |
- | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2oqi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2oqi OCA], [https://pdbe.org/2oqi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2oqi RCSB], [https://www.ebi.ac.uk/pdbsum/2oqi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2oqi ProSAT]</span></td></tr> | |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
== Function == | == Function == | ||
- | [ | + | [https://www.uniprot.org/uniprot/DPP4_HUMAN DPP4_HUMAN] Cell surface glycoprotein receptor involved in the costimulatory signal essential for T-cell receptor (TCR)-mediated T-cell activation. Acts as a positive regulator of T-cell coactivation, by binding at least ADA, CAV1, IGF2R, and PTPRC. Its binding to CAV1 and CARD11 induces T-cell proliferation and NF-kappa-B activation in a T-cell receptor/CD3-dependent manner. Its interaction with ADA also regulates lymphocyte-epithelial cell adhesion. In association with FAP is involved in the pericellular proteolysis of the extracellular matrix (ECM), the migration and invasion of endothelial cells into the ECM. May be involved in the promotion of lymphatic endothelial cells adhesion, migration and tube formation. When overexpressed, enhanced cell proliferation, a process inhibited by GPC3. Acts also as a serine exopeptidase with a dipeptidyl peptidase activity that regulates various physiological processes by cleaving peptides in the circulation, including many chemokines, mitogenic growth factors, neuropeptides and peptide hormones. Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline.<ref>PMID:10951221</ref> <ref>PMID:17549790</ref> <ref>PMID:10570924</ref> <ref>PMID:10900005</ref> <ref>PMID:11772392</ref> <ref>PMID:14691230</ref> <ref>PMID:16651416</ref> <ref>PMID:17287217</ref> <ref>PMID:18708048</ref> |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
- | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oq/2oqi_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oq/2oqi_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
Line 30: | Line 29: | ||
</div> | </div> | ||
<div class="pdbe-citations 2oqi" style="background-color:#fffaf0;"></div> | <div class="pdbe-citations 2oqi" style="background-color:#fffaf0;"></div> | ||
+ | |||
+ | ==See Also== | ||
+ | *[[Dipeptidyl peptidase 3D structures|Dipeptidyl peptidase 3D structures]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: | + | [[Category: Homo sapiens]] |
- | [[Category: | + | [[Category: Large Structures]] |
- | [[Category: Backes | + | [[Category: Backes BJ]] |
- | [[Category: Ballaron | + | [[Category: Ballaron SJ]] |
- | [[Category: Beno | + | [[Category: Beno DW]] |
- | + | [[Category: Kempf-Grote AJ]] | |
- | [[Category: Kempf-Grote | + | [[Category: Lai C]] |
- | [[Category: Lai | + | [[Category: Li X]] |
- | [[Category: Li | + | [[Category: Longenecker KL]] |
- | [[Category: Longenecker | + | [[Category: Lubben TH]] |
- | [[Category: Lubben | + | [[Category: Pei Z]] |
- | [[Category: Pei | + | [[Category: Pireh D]] |
- | [[Category: Pireh | + | [[Category: Sham HL]] |
- | [[Category: Sham | + | [[Category: Stewart KD]] |
- | [[Category: Stewart | + | [[Category: Trevillyan JM]] |
- | [[Category: Trevillyan | + | [[Category: Von Geldern TW]] |
- | [[Category: | + | |
- | + | ||
- | + |
Current revision
Human Dipeptidyl Peptidase IV (DPP4) with Piperidinone-constrained phenethylamine
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Categories: Homo sapiens | Large Structures | Backes BJ | Ballaron SJ | Beno DW | Kempf-Grote AJ | Lai C | Li X | Longenecker KL | Lubben TH | Pei Z | Pireh D | Sham HL | Stewart KD | Trevillyan JM | Von Geldern TW