This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2xjw

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:32, 20 December 2023) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
==Lysozyme-CO releasing molecule adduct==
==Lysozyme-CO releasing molecule adduct==
-
<StructureSection load='2xjw' size='340' side='right' caption='[[2xjw]], [[Resolution|resolution]] 1.67&Aring;' scene=''>
+
<StructureSection load='2xjw' size='340' side='right'caption='[[2xjw]], [[Resolution|resolution]] 1.67&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2xjw]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Chick Chick]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XJW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2XJW FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2xjw]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XJW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2XJW FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=CMO:CARBON+MONOXIDE'>CMO</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=RU:RUTHENIUM+ION'>RU</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.67&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1w6z|1w6z]], [[1kxx|1kxx]], [[4lyo|4lyo]], [[3lyo|3lyo]], [[1kip|1kip]], [[1t6v|1t6v]], [[1vds|1vds]], [[1ic7|1ic7]], [[1lzt|1lzt]], [[1kir|1kir]], [[2xbr|2xbr]], [[1lys|1lys]], [[132l|132l]], [[1e8l|1e8l]], [[1bwj|1bwj]], [[1yil|1yil]], [[1heo|1heo]], [[1sfg|1sfg]], [[1kxw|1kxw]], [[2x0a|2x0a]], [[2c8o|2c8o]], [[1g7l|1g7l]], [[1yl1|1yl1]], [[1sf4|1sf4]], [[1ior|1ior]], [[1h87|1h87]], [[1ljg|1ljg]], [[3lyt|3lyt]], [[1iot|1iot]], [[1dpx|1dpx]], [[1v7s|1v7s]], [[1ja6|1ja6]], [[1jis|1jis]], [[1ir8|1ir8]], [[2w1m|2w1m]], [[1uic|1uic]], [[1ykz|1ykz]], [[1xgq|1xgq]], [[1uie|1uie]], [[2war|2war]], [[1lji|1lji]], [[1lj3|1lj3]], [[1dpw|1dpw]], [[8lyz|8lyz]], [[1bwi|1bwi]], [[2iff|2iff]], [[2lyo|2lyo]], [[1g7h|1g7h]], [[1lks|1lks]], [[1jj0|1jj0]], [[1rfp|1rfp]], [[5lyt|5lyt]], [[1sfb|1sfb]], [[1jiy|1jiy]], [[1ir7|1ir7]], [[1iee|1iee]], [[1xei|1xei]], [[1hel|1hel]], [[1xek|1xek]], [[1at6|1at6]], [[1ljf|1ljf]], [[1mlc|1mlc]], [[2b5z|2b5z]], [[1f10|1f10]], [[1lsz|1lsz]], [[193l|193l]], [[1ljk|1ljk]], [[6lyt|6lyt]], [[1sq2|1sq2]], [[1vdq|1vdq]], [[1zmy|1zmy]], [[1lje|1lje]], [[2xth|2xth]], [[2d91|2d91]], [[1lze|1lze]], [[1b2k|1b2k]], [[1aki|1aki]], [[1uia|1uia]], [[1hen|1hen]], [[1yik|1yik]], [[1xfp|1xfp]], [[2d6b|2d6b]], [[1ndg|1ndg]], [[1lpi|1lpi]], [[1lsd|1lsd]], [[1flw|1flw]], [[2blx|2blx]], [[6lyz|6lyz]], [[1nbz|1nbz]], [[1lsg|1lsg]], [[4lyt|4lyt]], [[3hfm|3hfm]], [[1ved|1ved]], [[1jit|1jit]], [[1lzn|1lzn]], [[1wtn|1wtn]], [[1ja2|1ja2]], [[1uuz|1uuz]], [[1lyz|1lyz]], [[2d4i|2d4i]], [[2xbs|2xbs]], [[2fbb|2fbb]], [[1fdl|1fdl]], [[2lym|2lym]], [[1gxx|1gxx]], [[1lz9|1lz9]], [[1lse|1lse]], [[1lzh|1lzh]], [[1lsm|1lsm]], [[1jj3|1jj3]], [[7lyz|7lyz]], [[3lym|3lym]], [[1yky|1yky]], [[1kiq|1kiq]], [[1t3p|1t3p]], [[1heq|1heq]], [[2lzh|2lzh]], [[1uih|1uih]], [[1kxy|1kxy]], [[2w1l|2w1l]], [[1g7j|1g7j]], [[1b0d|1b0d]], [[2bly|2bly]], [[1her|1her]], [[1bhz|1bhz]], [[1wtm|1wtm]], [[1nby|1nby]], [[1ioq|1ioq]], [[1hep|1hep]], [[1jtt|1jtt]], [[1qio|1qio]], [[1lza|1lza]], [[1xgp|1xgp]], [[1ps5|1ps5]], [[1gwd|1gwd]], [[1jpo|1jpo]], [[1v7t|1v7t]], [[1h6m|1h6m]], [[1dqj|1dqj]], [[1j1p|1j1p]], [[2a7d|2a7d]], [[1ljj|1ljj]], [[1z55|1z55]], [[2c8p|2c8p]], [[1lsb|1lsb]], [[1f0w|1f0w]], [[2w1x|2w1x]], [[1flq|1flq]], [[1lzg|1lzg]], [[1lzc|1lzc]], [[1jj1|1jj1]], [[1rcm|1rcm]], [[1uid|1uid]], [[1yqv|1yqv]], [[1bgi|1bgi]], [[1hsx|1hsx]], [[1lzd|1lzd]], [[1lcn|1lcn]], [[1hew|1hew]], [[2cds|2cds]], [[2vb1|2vb1]], [[2aub|2aub]], [[1uib|1uib]], [[1hf4|1hf4]], [[1j1x|1j1x]], [[1ios|1ios]], [[1rjc|1rjc]], [[2cgi|2cgi]], [[1ir9|1ir9]], [[1uc0|1uc0]], [[1azf|1azf]], [[1ic4|1ic4]], [[1ljh|1ljh]], [[4lyz|4lyz]], [[1gpq|1gpq]], [[2a6u|2a6u]], [[2d4k|2d4k]], [[1xej|1xej]], [[1ja7|1ja7]], [[1mel|1mel]], [[1ri8|1ri8]], [[1uig|1uig]], [[1bvx|1bvx]], [[1qtk|1qtk]], [[1c10|1c10]], [[1lkr|1lkr]], [[1lyo|1lyo]], [[1n4f|1n4f]], [[1hsw|1hsw]], [[1g7m|1g7m]], [[2w1y|2w1y]], [[1jto|1jto]], [[1sf7|1sf7]], [[1lsf|1lsf]], [[1fn5|1fn5]], [[2d4j|2d4j]], [[5lyz|5lyz]], [[3lzt|3lzt]], [[1c08|1c08]], [[1ndm|1ndm]], [[1sf6|1sf6]], [[3lyz|3lyz]], [[1bvk|1bvk]], [[1uif|1uif]], [[1vau|1vau]], [[2lyz|2lyz]], [[1lma|1lma]], [[1fly|1fly]], [[1hc0|1hc0]], [[1j1o|1j1o]], [[1yl0|1yl0]], [[2lzt|2lzt]], [[1a2y|1a2y]], [[4lzt|4lzt]], [[1lsy|1lsy]], [[1uco|1uco]], [[1gxv|1gxv]], [[1ic5|1ic5]], [[1lsa|1lsa]], [[1p2c|1p2c]], [[5lym|5lym]], [[1ua6|1ua6]], [[1at5|1at5]], [[1vat|1vat]], [[1lj4|1lj4]], [[1f3j|1f3j]], [[1hem|1hem]], [[1vfb|1vfb]], [[1ja4|1ja4]], [[2a7f|2a7f]], [[4lym|4lym]], [[194l|194l]], [[1flu|1flu]], [[1lz8|1lz8]], [[1ykx|1ykx]], [[1vdt|1vdt]], [[2hfm|2hfm]], [[1bwh|1bwh]], [[1io5|1io5]], [[1lsn|1lsn]], [[1lzb|1lzb]], [[2bpu|2bpu]], [[1g7i|1g7i]], [[1lsc|1lsc]], [[1vdp|1vdp]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=CMO:CARBON+MONOXIDE'>CMO</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=RU:RUTHENIUM+ION'>RU</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Lysozyme Lysozyme], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.17 3.2.1.17] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2xjw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xjw OCA], [https://pdbe.org/2xjw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2xjw RCSB], [https://www.ebi.ac.uk/pdbsum/2xjw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2xjw ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2xjw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xjw OCA], [http://pdbe.org/2xjw PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2xjw RCSB], [http://www.ebi.ac.uk/pdbsum/2xjw PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2xjw ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/LYSC_CHICK LYSC_CHICK]] Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents. Has bacteriolytic activity against M.luteus.<ref>PMID:22044478</ref>
+
[https://www.uniprot.org/uniprot/LYSC_CHICK LYSC_CHICK] Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents. Has bacteriolytic activity against M.luteus.<ref>PMID:22044478</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 27: Line 26:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Chick]]
+
[[Category: Gallus gallus]]
-
[[Category: Lysozyme]]
+
[[Category: Large Structures]]
-
[[Category: Mukhopadhyay, A]]
+
[[Category: Mukhopadhyay A]]
-
[[Category: Romao, M J]]
+
[[Category: Romao MJ]]
-
[[Category: Santos-Silva, T]]
+
[[Category: Santos-Silva T]]
-
[[Category: Hydrolase]]
+
-
[[Category: Metal-protein adduct]]
+

Current revision

Lysozyme-CO releasing molecule adduct

PDB ID 2xjw

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools