This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


Phospholipase D

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:40, 28 August 2023) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 8: Line 8:
== Structural highlights ==
== Structural highlights ==
-
The <scene name='74/749398/Cv/2'>active site of PLD contains the substrate derivative dibutyrylphosphatidylcholine</scene><ref>PMID:15165852</ref>. Water molecule shown as red sphere.
+
The <scene name='74/749398/Cv/3'>active site of PLD contains the substrate derivative dibutyrylphosphatidylcholine</scene><ref>PMID:15165852</ref>. Water molecule are shown as red sphere.
-
 
+
-
</StructureSection>
+
==3D structures of phospholipase D==
==3D structures of phospholipase D==
-
Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
+
[[Phospholipase D 3D structures]]
-
[[4rw3]] – bsPLD – brown spider<br />
+
</StructureSection>
-
[[4rw5]] – bsPLD (mutant)<br />
+
-
[[3rlg]], [[3rlh]] – PLD (mutant) – ''Loxosceles intemedia''<br />
+
-
[[4q6x]] – PLD – cave spider<br />
+
-
[[2ze4]], [[1v0r]], [[1v0s]], [[1f0i]] – SaPLD – ''Streptomyces antibioticus''<br />
+
-
[[1v0v]], [[1v0w]] – SaPLD + phosphite<br />
+
-
[[1v0y]] – SaPLD + phosphatidylcholine derivative<br />
+
-
[[2ze9]] – SaPLD (mutant) + phosphatidylcholine<br />
+
-
[[1v0t]], [[1v0u]] – SaPLD + glycerophosphate<br />
+
== References ==
== References ==
<references/>
<references/>
 +
[[Category:Topic Page]]

Current revision

Phospholipase D complex with substrate dibutyrylphosphatidylcholine (PDB code 1v0y)

Drag the structure with the mouse to rotate

References

  1. McDermott M, Wakelam MJ, Morris AJ. Phospholipase D. Biochem Cell Biol. 2004 Feb;82(1):225-53. PMID:15052340 doi:http://dx.doi.org/10.1139/o03-079
  2. Oliveira TG, Di Paolo G. Phospholipase D in brain function and Alzheimer's disease. Biochim Biophys Acta. 2010 Aug;1801(8):799-805. doi:, 10.1016/j.bbalip.2010.04.004. Epub 2010 Apr 23. PMID:20399893 doi:http://dx.doi.org/10.1016/j.bbalip.2010.04.004
  3. Leiros I, McSweeney S, Hough E. The reaction mechanism of phospholipase D from Streptomyces sp. strain PMF. Snapshots along the reaction pathway reveal a pentacoordinate reaction intermediate and an unexpected final product. J Mol Biol. 2004 Jun 11;339(4):805-20. PMID:15165852 doi:http://dx.doi.org/10.1016/j.jmb.2004.04.003

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Alexander Berchansky, Joel L. Sussman

Personal tools